Virgibacillus dokdonensis: A21D_02553
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Entry
A21D_02553 CDS
T05261
Symbol
polC_1
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn03030
DNA replication
vpn03430
Mismatch repair
vpn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A21D_02553 (polC_1)
03430 Mismatch repair
A21D_02553 (polC_1)
03440 Homologous recombination
A21D_02553 (polC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpn03032
]
A21D_02553 (polC_1)
03400 DNA repair and recombination proteins [BR:
vpn03400
]
A21D_02553 (polC_1)
Enzymes [BR:
vpn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A21D_02553 (polC_1)
DNA replication proteins [BR:
vpn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A21D_02553 (polC_1)
DNA repair and recombination proteins [BR:
vpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A21D_02553 (polC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AUJ25600
UniProt:
A0A2K9J7S9
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All DBs
Position
2762206..2762820
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AA seq
204 aa
AA seq
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MTLVSIDFETANEKRTSPCAVGIVVSDGTQIVDEYYSLINPLTDFRAMNIRIHGITPEHV
RYAPTFTDVWPVLSTYLQQGMVIAHNASFDMSVLRNTLDRFGLTYPDLNYLCTVMLAKQI
WPQLHNHKLDTLATFHQIPFEHHHALEDARVAAKLFSKSLNESKQHTIEGLLAMYHIQSG
KIFHHGYHAPKKKKMRQYKQIFLT
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgactctagtatcaattgattttgaaactgctaacgaaaaacggacaagcccttgtgca
gttggcatcgttgtatcagatgggacacaaatagtggatgagtactatagtttgataaat
ccgcttacagattttcgagcaatgaacatacgaatacatggtattacgccagaacatgtt
cgttatgctccaacttttacagatgtttggccagtcctttctacatacttacagcaaggt
atggttattgctcataatgcgagctttgatatgagtgttctaagaaatacattagatcgt
tttgggttaacataccctgacttgaattatctatgtacagttatgcttgcaaaacaaata
tggccacagctacataatcataaattggatacattggctaccttccatcaaatccctttt
gaacatcatcatgctttagaagatgcccgtgttgcagcaaaacttttttctaaatcttta
aatgaaagtaaacagcatacaatagaaggcttattagctatgtatcatatacaaagtggt
aagatttttcatcatgggtatcatgcaccaaagaaaaagaaaatgcgtcaatataaacag
atttttcttacttaa
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