Virgibacillus dokdonensis: A21D_02709
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Entry
A21D_02709 CDS
T05261
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
vpn
Virgibacillus dokdonensis
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpn03400
]
A21D_02709 (addB)
Enzymes [BR:
vpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A21D_02709 (addB)
DNA repair and recombination proteins [BR:
vpn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
A21D_02709 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AUJ25755
UniProt:
A0A2K9J242
LinkDB
All DBs
Position
2941083..2944580
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AA seq
1165 aa
AA seq
DB search
MSLRFITGRVGTGKSGRIFDEIKEKLLDQPQGSAIFYLVPDQMTFQQEYNLFKDKEIRGS
IRAQVVSFSRLAWRVLQETGGGNKPFISTIGMQMMLRKIMEEKQGEWHVFQHAMEKHGFI
EHLETMITEFKRYAITPELLQAKMEHMNSYVHKKTGEESLLHKLEDLLYIYEKLLLSLQG
KYIDGEDQLQILADKIAHSRLLENAEIYIDGFYRFTPTELIVIQALLKKCKQVTVALTVD
KPEEEPTSEVDLFYQTKETFHVLKQLAASIDVTVEETIKLAPTYGRFRNRPYFAHLEQYF
DHRPAPTYEQPVPIQIAEAVHPRAEVEGAAQQIIHLVRDEGYRYQDMAIFIRQTDMYHDL
IATIFHDYDIPVFIDEKRTMLNHPLMEFIRSALDVVEGNWRYDAVFRLLKTDFVSISDKE
YPLTADAIDELENYVLEYGVRSRTSWFSEKDWIFQRFRGFDQMSQTDTERETQLRINRYR
KQVIKAFEGFDTQLREAETVKEKCVCLYRLLEELQVPTKLEQLRAEYDEQAEIEKGREQE
QVWDAVIQLLDEMVEMVGEETMSLSVFRKTLEAGLETLKFAHVPPSIDHVIVGSIDRSRI
SDIRCAFLLGVNEGIWPLKPSADGLINEQERNLLADHGVQLAETSKRQLLDDWFYMYVSF
TVASDQLWISYPLSDEEGNTKMPSQLIKRIENLFPSCCEHQLLQEPDELLEADRFVTTPH
KTRAALTAQLARYRKGYPIKPIWWHVLNWYIMQEKKNGTTYRILQSLYYQNKPSNLSAET
VEQLYPKQIKASVSRLETYYRCSYQHFAKYSLGLEERRTYKLDAPDIGQLFHEALKTITV
WIQQGDKEFSQLTQSDAASYAHQAVTKLSPILQHQILHSSNRYQYIQQKLEEVIARATYV
LSEQARRSHFSPVGLELGFGNDQDLPPLTVPLQNGFELMLRGRIDRVDKAVKDDELFLRI
IDYKSSAKELNLLEVYYGLALQMLAYLDVVITHSEQWLGVKATPAGILYFHVHNPMITGQ
DKLDDATIEKELFKKYKMQGLLLADEDIAKLMDQALESGASQIIPAAIKKNGGFYSYSKV
ADERTMKHLQQHVHQLMTQAGIDMTHGAIDLNPYYYKQQNACTHCPFQSVCQFDPTISTN
NYRKLADMKQDEILKRMQVEEDSEW
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccgttttataacaggtcgcgtaggtacagggaaaagcggtcgcatatttgat
gaaataaaagaaaaattgctagatcagccacaaggctcagctatattttatcttgtgcct
gatcagatgacttttcagcaagaatataatttatttaaagataaggaaattcgtggcagt
atacgggcgcaagtagttagcttttcacgtttagcttggagggttttacaagaaacaggg
ggaggaaataagccctttattagtacaataggaatgcaaatgatgttacgaaaaatcatg
gaagaaaagcaaggagaatggcatgtgtttcaacatgctatggaaaagcatgggtttatt
gaacacttagaaacgatgattaccgaatttaaacgctacgctattacacctgaattatta
caagctaaaatggagcatatgaatagctatgtacataagaaaacaggagaagaaagtctc
cttcataaattggaagacttgttgtatatttatgaaaaactattgctttcattacaagga
aaatatatagacggggaagatcaattacaaatacttgcagataaaattgctcattccagg
ctattagaaaatgcagaaatctatattgatggtttttatcgttttacacctacagaactt
atcgtaatacaagcattgttaaaaaaatgtaagcaagttacggttgcgttaacggtcgat
aagccagaagaagaacctacttcagaagttgatttgttttatcaaacgaaagaaacgttt
catgtattaaagcaattagctgcgtctatagatgtaacggtagaagaaacgattaaacta
gcccctacatatggtcgctttcgtaatcgcccatactttgctcatttggagcagtacttt
gatcatcgtccagcgccaacatatgaacaaccagtccctatacaaattgctgaggcagtt
catcctcgtgcagaggtggaaggtgctgcacagcaaattattcatttggtgcgagacgag
ggatatcgttatcaagatatggccatatttataaggcaaacagacatgtatcatgatcta
atcgcgacgatttttcatgattacgatatccctgtatttattgatgaaaagcggacgatg
ttaaaccatccgttaatggaatttattcgttcagcattagatgtcgttgagggaaattgg
cgttacgacgcggtttttcgtctgttaaaaacagattttgtgtcaatttcggacaaggaa
tacccgctaacagcagatgcgattgatgaattagaaaattatgtactggaatatggagtt
cgatcccgcacaagctggttttctgagaaagattggatttttcagcgttttcgtggattt
gatcagatgtcacaaacagatacagaacgggaaacacaattacgtattaaccgttatcga
aaacaagtaattaaggcctttgaaggctttgatacgcaattaagagaagcagaaacagtg
aaggaaaaatgtgtttgtttgtatcgattattggaagaacttcaagttcctacaaaatta
gaacaattgcgagctgaatacgatgaacaagctgaaatcgaaaaggggcgagaacaggaa
caagtttgggatgccgttattcaactgttggatgaaatggtagaaatggttggcgaagaa
acgatgtcattatctgtatttcgtaaaacattggaagctggtttagaaacattgaagttt
gctcatgtgcccccaagtatagatcatgttattgtcggttctattgatcgctcaagaata
agcgatattcgttgtgcctttttattaggtgtaaatgaaggaatttggccgttgaaaccg
tccgcggatgggttaattaatgaacaagagcgtaatttattagctgatcatggcgtacag
cttgctgaaacgagtaaacgtcaattactagacgactggttttatatgtatgtgtctttc
acagtagcaagtgatcagttatggattagttacccattaagtgatgaagagggaaatacg
aagatgccatcacaacttattaagcgaatagagaacttattcccaagctgttgtgaacat
caattgctgcaagaacccgatgaattgttagaagcagatcgttttgtgacaacacctcat
aaaacaagagctgccttaacagcacaactagcaaggtatcgtaaggggtatccaataaaa
cccatttggtggcatgtactcaattggtatatcatgcaggaaaaaaagaacggaacgaca
taccgtattttacagagcctgtattatcaaaataaacctagtaatctatcggcagaaacc
gttgagcagttatatccaaaacagattaaagcaagtgtttctagactggagacatattac
agatgttcttatcagcatttcgccaaatatagccttggtttagaggaaaggcgaacatat
aagctagatgcaccagatattggtcagttattccatgaagcgttaaaaacgataaccgta
tggattcaacaaggagacaaagaattttctcaactcacacaatctgatgcggcttcatac
gcacatcaagcagttaccaagctatctcctatattacagcaccaaatcttgcacagttcg
aatcgctatcagtatattcaacagaaattagaagaagtaattgcaagggcaacgtatgta
ctaagtgagcaagctagaagaagccatttttctccagttggtttggagttaggatttggg
aacgatcaagatctaccgccgttaactgttcctttgcaaaacggatttgaattgatgctt
agaggcaggatagaccgtgtcgataaggctgttaaagatgacgagctatttttacgaatt
attgattacaaatcaagtgcaaaggaattaaatttgcttgaggtgtactacggacttgca
ttgcaaatgttagcataccttgatgtagttattacgcattcggaacaatggctaggcgta
aaagcaacaccagcaggtattctgtatttccacgtccataatccgatgattacaggacaa
gacaagcttgatgatgccacgattgaaaaagaattatttaaaaaatataagatgcaaggg
ctattgttggcagatgaagatattgctaaactcatggaccaagctttagaatcaggtgct
agccagataattccagctgcaattaaaaagaatggtggattttacagttattctaaagta
gcagatgaaaggaccatgaagcatttacagcaacatgttcatcaactgatgacgcaggca
gggatagacatgacacatggtgctatcgatttaaatccatattattataaacaacaaaat
gcttgtacgcactgcccgtttcaatctgtatgtcaatttgatccgacgatatcaacgaac
aattaccgcaaactagcagatatgaagcaggatgaaatactcaaacgaatgcaagtagag
gaggattcagaatggtga
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integrated database retrieval system
