Virgibacillus dokdonensis: A21D_02869
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Entry
A21D_02869 CDS
T05261
Symbol
menD
Name
(GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00130
Ubiquinone and other terpenoid-quinone biosynthesis
vpn01100
Metabolic pathways
vpn01110
Biosynthesis of secondary metabolites
vpn01240
Biosynthesis of cofactors
Module
vpn_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
A21D_02869 (menD)
Enzymes [BR:
vpn01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
A21D_02869 (menD)
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Motif
Pfam:
TPP_enzyme_N
TPP_enzyme_M_2
TPP_enzyme_C
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
AUJ25914
UniProt:
A0A2K9J2F9
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Position
3104041..3105789
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AA seq
582 aa
AA seq
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MNHTEVLTRYVTNFVDELVVNGLTDAVISPGSRSTPLALTLAEHKEIKDWVIIDERSAAF
FALGLAKKTKRPVVLVCTSGTATANYYPAIVEAYHSRVPLIVLTADRPHELRGIGAPQAI
DQIKMYGDFVKWFHEMALPEAGTAMLHYVRNKAASAYHIAKEGNQGVVHLNFPFREPLMV
DFSLNDVWEINDISCTSPILPTFEGKKHLSKQQVEEILRQLAGKQRGVIVCGPQTDLHFP
VAVTKLAEKWGLPILADPLSQVRSGAHVSDVIIEGYDALLRNKTIREKLKPDFIIRFGAM
PVSKAYSFYVKQHQDALQMVVENDEGFREPTNNPTTFIFAEPTTYCEALADAGTETTSKE
WLQLWKQFNDIAKMHLNDQSDIEIREGEAIRAVMDSTPNQSTIFVGNSMAIRDLDSFFWK
TDKQIEVLANRGANGIDGVVSSGLGACAAGVRVTLVLGDLSFFHDMNGLHAAMHYQLPLT
ILLINNNGGGIFSFLSQADDKKHFEALFGTPLHIDFKYVVHMYGGYYVHAKTEADVKQKL
IESYNREGLSVIEVKTNRDMNANWHKTKWQAIEQEILEERNR
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatacagaagttttgacgcgatacgtgacgaattttgtcgatgaattagttgtt
aatggtttgacagacgctgttatttctcctggatctagatccacgccattagcgctaaca
ctggctgagcataaagaaataaaggattgggttattattgatgaaaggtcggctgctttt
tttgcgttaggacttgcgaaaaaaacgaaacgtcctgttgtacttgtttgtacttctgga
acagcgacagccaattattatcctgcaattgtggaagcctatcatagtcgagttccactc
atcgtgttaactgctgacaggccacatgaattaagaggaataggcgcgcctcaagcaatt
gatcaaataaaaatgtatggagattttgtgaaatggtttcacgaaatggcacttccagaa
gcaggaactgccatgctacattatgtgcgaaataaagcggcaagcgcttaccatatcgcg
aaggaaggaaatcagggagttgttcacttgaattttccttttcgtgaaccattaatggtg
gattttagtcttaatgatgtatgggaaataaatgatatttcctgtacaagtcccatatta
ccgacgtttgaagggaaaaagcatttgtctaaacagcaagtggaagaaattttgcgtcaa
ttagcaggtaaacaaagaggggttattgtatgcggaccgcaaacagatttgcattttcca
gttgcggttacgaagcttgctgagaagtggggacttcctattttagctgaccctttatcg
caagttcgatctggggctcatgtttctgatgtaattattgaaggatatgatgcgctactg
cgtaataaaaccattcgggaaaaactaaagcctgattttattattcgttttggagccatg
cctgtttcgaaagcctattctttctatgtgaagcaacaccaggatgcacttcaaatggtc
gttgaaaatgatgaaggtttccgcgaaccaaccaataatccgacgacgtttatttttgca
gaaccaactacttattgtgaggctttagcagatgcagggactgaaactacatcaaaagaa
tggttgcaattgtggaagcaatttaacgacattgcgaagatgcatttaaatgaccaatca
gatattgaaattagagaaggggaagcgattcgtgctgtcatggattcaactccaaaccag
agcacaatttttgtaggcaacagtatggcaattcgtgatttagattcgttcttttggaaa
acagataaacaaatagaagtgcttgccaatcgaggggcaaatggtattgatggtgttgta
tcttctggtttaggcgcttgtgcggctggggtaagagttacgcttgtattaggcgattta
tctttttttcatgatatgaatgggctgcatgcggcgatgcattaccaattgccattgact
attttattaattaataataatggtggtggaatattttcctttttatcgcaggctgatgat
aaaaaacattttgaagctttattcggtacacctttacatatcgatttcaagtatgttgtt
catatgtatggaggttattatgtgcatgcaaaaacagaagcggatgtgaagcagaaactc
attgaaagttacaacagagaaggtctgtccgtaattgaagtgaaaacaaatagagacatg
aatgccaactggcacaaaacgaaatggcaggccattgaacaggaaattttggaggagagg
aatagatag
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