KEGG   Virgibacillus dokdonensis: A21D_02975
Entry
A21D_02975        CDS       T05261                                 
Symbol
polA_2
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
vpn  Virgibacillus dokdonensis
Pathway
vpn03030  DNA replication
vpn03410  Base excision repair
vpn03420  Nucleotide excision repair
vpn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vpn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A21D_02975 (polA_2)
   03410 Base excision repair
    A21D_02975 (polA_2)
   03420 Nucleotide excision repair
    A21D_02975 (polA_2)
   03440 Homologous recombination
    A21D_02975 (polA_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vpn03032]
    A21D_02975 (polA_2)
   03400 DNA repair and recombination proteins [BR:vpn03400]
    A21D_02975 (polA_2)
Enzymes [BR:vpn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     A21D_02975 (polA_2)
DNA replication proteins [BR:vpn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     A21D_02975 (polA_2)
DNA repair and recombination proteins [BR:vpn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     A21D_02975 (polA_2)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A21D_02975 (polA_2)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 HHH_2 XPG_I Phage_cap_E Enkurin
Other DBs
NCBI-ProteinID: AUJ26017
UniProt: A0A2K9J247
LinkDB
Position
3225236..3227878
AA seq 880 aa
MSNKLVLIDGNSIIYRAFFALPLLNNDKGVYTNAVYGFTTMLLRMIEEEKPTHMLVAFDA
GKTTFRHDTYKEYKGGRQKTPPELSEQFPLLKEVLDAFSIPHYELDNYEADDIIGTLSKQ
VEENGWEVTVISGDKDLLQLVSDHVTVSLTKKGISDVERYTPAFLKEKMEITQEQIIDLK
ALMGDNSDNIPGVPGVGEKTAVKLLKQFHTLENVYDHLEDVSGKKLKEKLATHKKEAFMS
KELVTINRSSPITIKPDDVIYSGYAQDKVRAIFTELGFQSLLTRMQGSDEDKPMETAEQH
PPIEFSILDEVNHDLFTGEEALIVEMLEENYHQASIQGFSIVNEEAAYFLPKDIAMQSEQ
FQSWLRDSSMKKYVFDAKKTFVSLSRVNMHIEGIAFDMLLASYLINPSENNHDIPAISHR
LGRTDVYLDDEVYGKGAKRKLPEQSIFREHVVRKASMLYELKPQMEKQLKENEQYELFKE
LEMPLALILGEMEHTGVLVDTKRLEEMRTDLKNRLAELEKEVHELAGEEFNLNSPKQLGP
ILFEKLGLPVIKKTKTGYSTAADVLEQLQDEHEIIPKLLLYRQLGKLQSTYIEGLLKVVD
EKTNKIHTRFNQALTQTGRLSSIEPNLQNIPIRLEEGRKIRQAFIPAQKDWVMFAADYSQ
IELRVLAHIARDEKLMTAFKQEKDIHTQTAMDVFHVNKEEVSANMRRQAKAVNFGIVYGI
SDYGLSQNLGITRKEAKQFIDRYFESYPGVKTYMEEIVQEAKHKGYVSTIMNRRRYLPDI
TSRNFNQRSFAERTAMNTPIQGSAADIIKKAMIDLHGKLEEQQLQARILLQVHDELILEA
PQSEVETLKEIVPAIMEHTVDLNVPLKVDYAYGDSWFDAK
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgagcaataaattggtattaattgatggtaacagtattatttaccgtgcattcttcgcg
ttgccgcttttaaataatgataaaggcgtatatacaaatgctgtatatggctttacaacc
atgctattaagaatgatagaggaagaaaagcctacacatatgttggttgcatttgatgcc
ggtaaaacaacttttagacatgatacatataaggaatataaaggaggaagacaaaaaaca
cctccagaactatcggaacaattccctttattaaaagaagtattagatgcattttctatc
ccacattatgaactggataattatgaggcagatgatataatcggtacactatccaagcaa
gtagaagaaaatggatgggaagtaaccgttatatctggtgataaagacttgcttcaatta
gtttctgatcacgtgactgtaagtttgactaaaaaaggaattagcgatgttgagcgttat
acacctgcttttttaaaggaaaaaatggaaattacgcaagaacaaattattgatttgaaa
gcattgatgggagataattcagacaatatcccaggtgtccctggggtgggggagaaaacg
gcagtcaaattactaaaacaatttcatacattagaaaatgtgtatgaccatttggaagat
gttagtgggaaaaagctgaaagagaagctagcaactcataaaaaagaagcctttatgagt
aaagaacttgtaaccattaaccgatcttcaccaattacaattaaacctgacgatgttatc
tatagcggatatgcgcaagataaagtcagagcgatttttaccgaactcggctttcaatcg
ttattaactcgtatgcaagggtctgacgaagataagccaatggaaacagcggaacaacat
cctccaattgaattttccatattagatgaagtaaaccatgatttgtttactggagaagaa
gcacttattgttgaaatgttagaagaaaattatcatcaagcatccattcaaggcttttcc
atcgttaatgaggaagcggcttactttttaccaaaagatatagccatgcaatcagaacaa
tttcaatcatggttacgggattcttctatgaaaaaatatgtatttgatgccaaaaaaaca
tttgtttctttatcacgagttaatatgcacattgaaggtatcgcgtttgatatgctctta
gcttcttatttaattaacccatcggaaaacaatcatgatataccagctattagccacaga
ttaggaagaacggatgtatatctagatgacgaggtgtatgggaagggagcaaagcggaag
ctcccagaacagtcgatttttagagaacatgtggtaaggaaagcaagcatgctgtacgag
ctgaaaccacagatggaaaagcaacttaaagaaaatgaacagtacgaattgtttaaggag
ttagaaatgccattggcgcttatccttggagagatggagcatacgggcgtgcttgttgat
acaaaacgtttagaagaaatgcgcaccgacttgaaaaatcgtttagcagaattagagaaa
gaggttcatgaattggctggtgaggagtttaatttaaactctccaaaacagctgggtcca
attctgtttgaaaaactaggtctcccagttattaagaagactaaaacgggttattccact
gctgctgatgtgttagaacaacttcaggatgagcatgaaatcattccgaagctgttatta
tatcgccaattgggtaaattgcagtccacttatattgaagggttattaaaagtagtagat
gaaaaaacaaataaaattcacactcgttttaatcaagcactaacgcaaacaggtcgttta
agctccatcgaaccaaacttacaaaatatccctatacgtttggaagaaggtaggaaaata
cgtcaagcctttattcctgctcaaaaggattgggttatgtttgctgctgattactctcaa
attgagttgagagtattagcacatattgcacgcgatgaaaaattaatgacggcatttaaa
caagaaaaagatattcatacgcagacagcgatggatgtctttcatgtgaataaagaagaa
gtttccgcaaatatgcgtagacaagcaaaagcagttaacttcggtattgtatacggcatt
agtgattacggattatcgcagaacctaggtattactcgaaaagaagcgaaacagtttatt
gatcgatattttgagagttacccaggggtaaagacatacatggaagagatcgttcaagaa
gcaaaacataaggggtacgtaagcacgattatgaatcgtagaagatatttgccggatatt
accagtcgtaactttaatcaaagaagttttgctgaacgaactgctatgaatacgccaatt
caaggaagtgcagcggacattattaaaaaagcaatgattgatttgcatggtaagctagag
gaacaacagttgcaagcacgaattttattacaagtacacgatgaattaattttagaagca
ccgcagtctgaagtagagacattaaaagaaatagtgccagctattatggaacatacagtg
gatttaaatgtacctttaaaggttgattatgcttatggagatagttggtttgatgctaag
taa

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