Virgibacillus dokdonensis: A21D_02976
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Entry
A21D_02976 CDS
T05261
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A21D_02976 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpn03400
]
A21D_02976 (mutM)
Enzymes [BR:
vpn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A21D_02976 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A21D_02976 (mutM)
DNA repair and recombination proteins [BR:
vpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A21D_02976 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF2844
Tom5
Motif
Other DBs
NCBI-ProteinID:
AUJ26018
UniProt:
A0A2K9J239
LinkDB
All DBs
Position
3227891..3228724
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AA seq
277 aa
AA seq
DB search
MPELPEVETIRNTLKRFVINRTIDQIDIHWPKIIKQPDDIKQFQSEIIGQKILDIHRKGK
FLLFELNDYVLVSHLRMEGKYSVHQEGEPVKKHTHIIFRFSTGEELRYNDVRKFGTMHLF
HRGEVMNQKPLCLLGPDPFDDAFTAEYFIEKLKKTKRVIKSALLDQTIVAGLGNIYVDET
LFKARIHPLVPANKLTQKEIKEVRKQAIATLEEAVLQGGTTIRSYVNSQGEMGMFQQKLY
VYGQENKACKTCGNTIAKLKVGGRGTHICTSCQPIKR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagtagaaaccattcgcaacacgttaaaacgatttgtaatcaac
agaacgattgatcaaatagatattcattggccaaaaataattaagcaacctgatgatata
aagcaatttcagtcagagattatagggcaaaaaattttagacattcatcgaaaagggaaa
tttttattgtttgaactaaacgattatgttctcgtttcacatcttcgaatggaagggaaa
tatagcgttcatcaagaaggagaaccagtaaagaaacatacgcatattatctttcgattt
tctaccggagaagaattacgttataatgacgtccgaaaatttggcacgatgcatttgttt
catcggggagaagtaatgaatcaaaagccgttatgtttgttaggtcctgacccattcgat
gatgcatttacggcagaatactttattgagaagctgaaaaaaacaaagcgcgttattaaa
tccgctttattagatcaaacgattgtagctggattaggaaacatctatgtggatgaaaca
ttgttcaaggcacgtattcatcctttagtaccagcaaacaaattaacgcagaaagaaata
aaagaagttcgcaagcaagccattgctactttagaagaggctgtattgcagggcggtaca
acgatacgctcttatgtcaatagccaaggtgaaatggggatgtttcaacaaaaactttat
gtatatggtcaagaaaataaagcttgtaaaacatgtggtaataccattgccaaattaaaa
gttggtggacgtgggacacatatttgtacaagctgtcagccaataaagaggtga
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