Virgibacillus dokdonensis: A21D_03019
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Entry
A21D_03019 CDS
T05261
Symbol
frdA
Name
(GenBank) Fumarate reductase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00020
Citrate cycle (TCA cycle)
vpn00190
Oxidative phosphorylation
vpn00650
Butanoate metabolism
vpn00720
Other carbon fixation pathways
vpn01100
Metabolic pathways
vpn01110
Biosynthesis of secondary metabolites
vpn01120
Microbial metabolism in diverse environments
vpn01200
Carbon metabolism
Module
vpn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vpn_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
A21D_03019 (frdA)
00650 Butanoate metabolism
A21D_03019 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
A21D_03019 (frdA)
00720 Other carbon fixation pathways
A21D_03019 (frdA)
Enzymes [BR:
vpn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
A21D_03019 (frdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
GIDA
NAD_binding_8
FAD_oxidored
DAO
FAD_binding_3
AlaDh_PNT_C
PKMT_2nd
Motif
Other DBs
NCBI-ProteinID:
AUJ26061
UniProt:
A0A2K9J6W1
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All DBs
Position
3273113..3274876
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AA seq
587 aa
AA seq
DB search
MSKRKIAIVGGGLAGLMATIKAAEAGVSVDLFSIVPVKRSHSVCAQGGINGAVNTKGEGD
SPWLHFDDTVYGGDFLANQPQVKAMCDAAPGIIHMFDRMGVMFNRTPEGLLDFRRFGGTQ
MHRTAYAGATTGQQLLYAVDEQVRRYEVEGLVTKYENWEFARAVIDEEGVGRGIVAQNVK
THEIKAFPSDATIFATGGPGIIFGKSTNSMINTGSAASKLYQQGAKYANGEFIQIHPTAI
PGDDKLRLMSESARGEGGRIWTYKDGEPWYFLEEKYPAYGNLVPRDIATREIFDVCVNQK
LGINGENMVYLDLSHKDPKELDIKLGGIIEIYEKFVGEDPRKVPMKIFPAVHYSMGGLWV
DINQMTNIPGIFAAGECDYSQHGANRLGANSLLSAIYGGAVAGPKAMEYIEGLEKHVDDL
PSHLFEENVKVEQDHFEKLMNMDGEENAYQLHKELGQWMTDNVTVVRDNKKLLQTDEKIQ
ELLQRFENININDTSRWSNQGVMFTRQLENMLHLARVITQGAYNRNESRGAHYKPEFPDR
NDEEWLKTTIAEFDVEEKAPKFSYEDVDISLIKPRKRDYTKKSEGSK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacggaaaattgccatagttggcggaggtttagctggcttaatggcaacaata
aaagcagcagaagcaggagtaagtgttgatttattttccattgttcctgtaaagcgctct
cactctgtatgtgctcaaggtggaataaatggtgcagttaatactaagggagaaggggat
tctccttggcttcactttgatgatacagtgtacggtggagatttcttagcaaaccaaccg
caagtaaaagcgatgtgtgatgcagcgcctggaattattcatatgtttgatcggatgggt
gttatgtttaaccgcacacctgaaggattgctagattttcgtcgttttggtggaacgcaa
atgcatagaacagcttatgctggagcaacaacaggacaacaattactttatgcggtggat
gagcaagttcgtcgttatgaggtagaaggtcttgtgacaaaatatgaaaactgggaattt
gcgcgggcagttattgatgaagaaggtgttggtagagggattgtagctcaaaatgtgaaa
acgcatgagataaaagcatttccatctgatgcaaccatttttgctactggtggtcctgga
attatctttggtaaatctactaattctatgattaatactggatctgctgcaagtaagttg
taccagcaaggtgcaaaatatgccaatggtgaatttattcaaattcatcctacagctatt
cctggtgatgataaattacgattaatgagtgagtctgcccgtggtgaagggggcagaatt
tggacatataaagatggagaaccttggtatttcttagaggaaaaatatccagcttatggt
aacctcgtaccaagagatatcgccacacgtgaaatttttgacgtatgtgtgaaccaaaaa
cttggtataaatggcgagaatatggtgtatttggatctatcacataaagatccaaaagag
cttgatataaaactaggcggaattattgagatatatgagaaatttgttggcgaagatcct
cgaaaagtgccgatgaaaatcttccctgctgtccattattccatgggcggactgtgggtc
gatattaatcaaatgactaatatccctggtatttttgctgcaggagaatgtgattattcg
cagcatggtgctaaccgtcttggtgctaattcattattgtctgctatttatggaggagct
gttgctggtccaaaggcaatggaatatatagaaggtttagagaagcatgtcgatgatttg
ccatctcatttatttgaagagaatgtaaaagtggaacaagaccactttgaaaaattaatg
aacatggatggcgaagaaaatgcttatcagcttcataaggaacttggtcagtggatgact
gataacgtaaccgtagtgcgtgataataaaaaattattgcaaacagatgaaaagattcaa
gaactactgcaacgttttgaaaacattaatattaatgatacctctcgttggagtaaccaa
ggtgttatgtttacacgtcagttggaaaacatgcttcatttagcacgtgttattacacaa
ggcgcttataatcggaatgagagccgtggtgctcattataaacctgaattcccagatcga
aatgatgaagagtggttgaaaacaacgattgcagaatttgacgtggaagaaaaagcacct
aaattttcttatgaggatgtagatatttcattaatcaaacctcgtaagcgtgactacacg
aaaaaaagtgaagggagtaagtaa
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