Virgibacillus dokdonensis: A21D_03079
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Entry
A21D_03079 CDS
T05261
Symbol
hemB
Name
(GenBank) Delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00860
Porphyrin metabolism
vpn01100
Metabolic pathways
vpn01110
Biosynthesis of secondary metabolites
vpn01120
Microbial metabolism in diverse environments
vpn01240
Biosynthesis of cofactors
Module
vpn_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
vpn_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
A21D_03079 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpn04147
]
A21D_03079 (hemB)
Enzymes [BR:
vpn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
A21D_03079 (hemB)
Exosome [BR:
vpn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
A21D_03079 (hemB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
AUJ26119
UniProt:
A0A2K9J2H0
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All DBs
Position
3331585..3332574
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AA seq
329 aa
AA seq
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MTNIPTFDRHRRLRRTAGMRDLVRETHLHKTDLVYPMFIVEGEKVRKQVPSMPGVYQLSL
DLLTEEIDELEELGIQAVILFGVPNEKDEQGTGAFIDEGIVQQATRKIKTKVPSMLVIAD
TCLCEYTSHGHCGVIHDHDVDNDASLELLAKTAVSQAKAGADIIAPSNMMDGFVAVIRQA
LDQAGFTQIPIMSYAVKYASSFYGPFRDAADSTPQFGDRKTYQMDPANRLEALREAKSDV
HEGADFLIVKPALSYLDIVREMKNNFDLPIVAYNVSGEYAMVKAAAQNGWIDEQALVMEK
LLSMKRAGADLIITYFAKDVAKWLVEKNR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacataccgacttttgacagacaccgtagattaagacgtacggctggtatgaga
gacttagtaagagaaacacatttgcataaaaccgatcttgtctatcccatgtttattgtt
gaaggagaaaaggtgagaaaacaggttccttctatgccaggagtataccagttatcgttg
gatttacttacggaagaaatagatgaactagaagaacttggtattcaagctgttattttg
tttggggtgccaaatgaaaaagatgaacaagggacgggcgcttttattgatgaagggatt
gtccaacaagctacacgaaaaattaaaacaaaagtaccatcaatgctcgtaattgcagat
acttgtttgtgtgaatatacgtctcatggacattgtggagtcattcatgaccatgatgta
gataatgatgcgtcattagagttacttgctaaaacagcagtctcccaagcaaaggcaggg
gctgacattattgcaccgtcaaacatgatggatgggtttgtagcagttattcgtcaagct
ttagatcaagctggttttacacaaattcctattatgtcttacgcggttaaatatgcttct
tctttttatggtccattccgagatgcagcagatagtacaccacaatttggagatcgaaaa
acataccaaatggaccccgcgaatcgattagaagcacttcgtgaggcgaaatcagatgtt
catgaaggtgctgattttttaattgtaaaaccagctttaagctacttagatattgtgaga
gaaatgaagaataactttgatttgccgattgttgcctataatgtaagcggcgaatatgcg
atggtgaaagctgcagcgcaaaatggctggattgatgaacaggcgctggttatggaaaaa
ctattatctatgaaacgagctggagcagatctaattataacttattttgcaaaagatgtt
gcaaaatggttagtagaaaaaaatagatag
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