Virgibacillus dokdonensis: A21D_03168
Help
Entry
A21D_03168 CDS
T05261
Name
(GenBank) tRNA-specific adenosine deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00240
Pyrimidine metabolism
vpn01100
Metabolic pathways
vpn01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
A21D_03168
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpn02044
]
A21D_03168
Enzymes [BR:
vpn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
A21D_03168
Secretion system [BR:
vpn02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
A21D_03168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
Motif
Other DBs
NCBI-ProteinID:
AUJ26208
UniProt:
A0A2K9J2N7
LinkDB
All DBs
Position
3423673..3424251
Genome browser
AA seq
192 aa
AA seq
DB search
MERISWDQYFMAQSHLLALRSTCTRLMVGATIVRDKRIIAGGYNGSVSGSVHCIDDGCYV
IDGHCVRTIHAEANALLQCAKFGVPTDGADIYVTHFPCLQCCKQLIQAGIQTVIYAKDYH
NHPYAVSLFSEAGIKTKKVELDDVKVDTNYMEKQVFVKQLLQKMEKGVLEADELRNLKED
AVRLFHLDVQGD
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcatttcatgggaccaatattttatggcacaaagccatttattggctcttcgt
agtacgtgtacaagacttatggtcggtgccacaattgtaagagataaacgaataatagct
ggcggttataatggcagtgtgtcagggagtgtccattgtattgatgacggctgttacgta
attgatggacattgtgtgagaacgattcatgctgaagcaaatgcattactacaatgcgca
aagtttggcgttcctacagatggtgctgatatttatgtcactcattttccgtgcttacaa
tgctgtaaacagttaatacaagcaggtatacaaacagtaatttatgcaaaggattatcat
aatcatccatacgctgtttctctattttcggaagcgggcataaaaacaaaaaaagtagaa
cttgatgatgttaaggttgatacgaattacatggaaaaacaagtatttgtaaaacaactc
cttcaaaaaatggaaaaaggagtgctagaagctgatgagttaagaaacttaaaagaagat
gctgtgcgtctgtttcatttagatgtgcaaggagattaa
DBGET
integrated database retrieval system
