Virgibacillus dokdonensis: A21D_03326
Help
Entry
A21D_03326 CDS
T05261
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00300
Lysine biosynthesis
vpn00470
D-Amino acid metabolism
vpn01100
Metabolic pathways
vpn01110
Biosynthesis of secondary metabolites
vpn01120
Microbial metabolism in diverse environments
vpn01230
Biosynthesis of amino acids
Module
vpn_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
vpn_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A21D_03326 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A21D_03326 (lysA)
Enzymes [BR:
vpn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
A21D_03326 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AUJ26360
UniProt:
A0A2K9J8X4
LinkDB
All DBs
Position
3580293..3581600
Genome browser
AA seq
435 aa
AA seq
DB search
MIIDNHPFTVNKQGHLEIGGIDSVSLAKKYGTPLYVYDVQMIRNNCRAFVNTFKKMDIPA
KVAYASKAFSSIAMLQVMKQEGMYLDVVSEGELYTALQAGFPTEKIHLHGNNKSIAEIRM
AIENNIGCIVVDNFQEIQHIRSLLKDYNKQMDVLMRVTPGVESKTHQYIMTGHEDSKFGF
NLQNGQAEDALLKMIDDPYICFQGLHCHIGSQIFETDRFILATNMLFQALKMWKQQYNYV
PNVLNLGGGYGIRYTKEDAPISYAPFIEELVYEVQKQAESLAISMPEIWIEPGRAIAGNA
GITLYTIGSMKEIPGIRNYIAVDGGMTDNLRPSLYQAKYEAVLANKADWLVEKNVSIAGK
CCESGDMLIWDLPLPAVSQNDILAVFSTGAYGYSMANHYNRFAKPAVVFVENGKDKLVVR
RETYKDVTRHDLSFE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgataattgataatcatccatttacagtaaataaacaaggacatttagaaattggcggt
atagatagtgtatcattggcaaaaaaatatggaacacctttatatgtttatgatgtgcaa
atgattcgaaacaactgtcgcgcttttgtaaatacgtttaaaaaaatggatattcctgcg
aaagtagcttatgctagcaaggcattttcatcaattgctatgttacaagtcatgaagcaa
gagggaatgtatttggatgtggtatcggaaggagaattatacacagcattacaagctggt
tttccaactgagaaaattcaccttcatggaaataataaaagtattgcagagattaggatg
gcaattgaaaataatattggatgtattgtggtagataactttcaagaaatacaacatatt
cgttccttgcttaaagattacaataaacaaatggacgttttaatgcgagtaacaccaggg
gtagaatctaaaacacatcagtatattatgacaggacatgaagattctaagtttgggttt
aacttgcaaaacggacaagcggaggatgcacttttaaagatgatcgatgacccatatatt
tgttttcaaggattgcattgccatataggttcacaaatatttgaaacagaccgatttata
ttagctacaaatatgttatttcaagcattaaaaatgtggaagcaacagtataattatgta
cctaatgtgttaaatttgggtggaggctatggaattcgttacacaaaggaggatgctcct
atatcttacgccccatttatagaagaattagtttatgaagtgcaaaaacaagcagaatct
ttagcgatttcaatgccagaaatttggatagaacctggtagagcaattgctggcaatgct
ggaattactttatatactataggttcgatgaaagaaattccaggaattcgaaattatata
gcggttgacgggggtatgacagataatctacgtccctcgttatatcaagcaaaatatgaa
gcggtgttagcaaataaagcagattggctagtagaaaaaaatgtatctattgctggtaaa
tgttgcgaatcaggggatatgcttatatgggatctacctttgcctgccgtttcacagaat
gacattttggccgttttttcaacgggggcttatggttattctatggcaaaccattacaat
cgatttgcaaaacccgcagtggtttttgtggaaaatggcaaggataaactcgttgtcaga
cgtgagacatataaagatgtgacccgccatgaccttagttttgaataa
DBGET
integrated database retrieval system