Virgibacillus dokdonensis: A21D_03441
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Entry
A21D_03441 CDS
T05261
Symbol
nprA_5
Name
(GenBank) Transcriptional activator NprA
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A21D_03441 (nprA_5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpn03000
]
A21D_03441 (nprA_5)
Transcription factors [BR:
vpn03000
]
Prokaryotic type
Helix-turn-helix
Other families
A21D_03441 (nprA_5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_1
TPR_12
TPR_2
TPR_MalT
HTH_19
TPR_8
HTH_31
Sel1
CFAP70_TPR_C
TPR_17
Motif
Other DBs
NCBI-ProteinID:
AUJ26475
LinkDB
All DBs
Position
complement(3685257..3686534)
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AA seq
425 aa
AA seq
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MIDIGSIIKLQRTKRNMTQEELSEGIVSLSYLSKIENKKTKASPEIIQLLCNRLEIELTE
KLDVEIEEKCQEWYGMLYDRFDKQKISEIYEELQQLLGRSINDQTLMFEIHKIRYYCIMR
DLKKALCKINELHEMASSFNPIHKYYWHKFQGNYYSFKTYHHQAIQHYKLAEETISFANI
QEHETADLQYIISIEHSKLWNDLESIEYAKKAMGIFQKNYNFIRCAQCHILLGIAHHRIK
NLDKATKNYNLALQLGELKNNEDVVHLAHYNLGYLHSITGNSEKAIEHYLIAIQNNNFKE
KTKLVSLIRLIQEFYLVGDYKKAKNYLDQTTLVLKTYINDYNEYTDDLHDYVIKVYTHLL
NGETKQFISVLANDFIPYLEKKRNYEYLAFYAKMLGNHLEKSGKYKTSLQYYKLANSSYE
KLFNL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
ttgatagatataggttctattatcaaattacagcgaaccaagcgcaatatgacacaagag
gaattgtcagaaggcattgtttcattatcctacttatcaaaaatagaaaataagaagaca
aaagctagtcctgaaattattcaattgctttgtaaccgattagagattgagcttacggaa
aagctagatgtagaaattgaagaaaaatgtcaagagtggtacggaatgctttatgaccga
ttcgataaacagaaaatatcagaaatatatgaagaattgcagcagttgctgggccgaagt
attaatgatcagacactcatgtttgagattcataaaattcgttattactgtattatgcgg
gatcttaaaaaagcattatgtaaaattaacgaactccatgagatggcaagttcatttaac
cctatacataaatattattggcataaatttcaaggaaactattactcatttaaaacgtac
caccatcaagctatacaacattataaattagcagaagaaactatcagttttgcaaatatt
caagaacatgaaacagcagatctgcaatatatcatatctatagaacatagtaaattatgg
aatgatcttgagagtattgaatatgcaaaaaaggcaatgggaatttttcaaaaaaactac
aattttattcgctgtgctcaatgccatatcctattggggattgcgcaccatagaattaag
aatttagataaggctaccaaaaattataacttggcattacaattgggagaattaaaaaac
aatgaagatgtagttcatctagcacattacaatctgggttacctgcattcaataactgga
aattcagaaaaagcaatcgaacattatctaattgcaatacaaaataataactttaaagaa
aaaactaaattagtatccctaattcgattaattcaagagttttatttagttggggattat
aaaaaagccaagaactatttggatcaaacaacattagttttgaaaacatatattaatgat
tataacgaatatactgatgatttacacgactatgttatcaaagtatatacacatttatta
aatggagaaactaaacaatttatatctgtattagctaatgattttataccttacctagag
aaaaaaagaaattatgagtatttagctttttatgcaaaaatgttaggtaaccatttagag
aaaagtggtaagtataaaacatctttacaatattataaattagctaatagcagttatgag
aaattatttaatttataa
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