Virgibacillus dokdonensis: A21D_03477
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Entry
A21D_03477 CDS
T05261
Symbol
citB
Name
(GenBank) Aconitate hydratase
KO
K27802
aconitate hydratase A / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00020
Citrate cycle (TCA cycle)
vpn00630
Glyoxylate and dicarboxylate metabolism
vpn00640
Propanoate metabolism
vpn00720
Other carbon fixation pathways
vpn01100
Metabolic pathways
vpn01120
Microbial metabolism in diverse environments
vpn01200
Carbon metabolism
vpn01210
2-Oxocarboxylic acid metabolism
vpn01230
Biosynthesis of amino acids
Module
vpn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpn_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
vpn_M00012
Glyoxylate cycle
vpn_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
A21D_03477 (citB)
00630 Glyoxylate and dicarboxylate metabolism
A21D_03477 (citB)
00640 Propanoate metabolism
A21D_03477 (citB)
09102 Energy metabolism
00720 Other carbon fixation pathways
A21D_03477 (citB)
Enzymes [BR:
vpn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
A21D_03477 (citB)
4.2.1.99 2-methylisocitrate dehydratase
A21D_03477 (citB)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
AUJ26511
UniProt:
A0A2K9J7K8
LinkDB
All DBs
Position
complement(3723571..3726285)
Genome browser
AA seq
904 aa
AA seq
DB search
MGKSNTLNAKKQFKLNDKTYNYYELKALEEAGFGKVARLPFSIRVLLESLIRQHDGHQIK
DEHVERLAKWGTKEGVGVDVPFKPSRVILQDFTGVPAVVDLASLRKAMVDMGGEPGEINP
EVPVDLVIDHSVQVDQYGTANALKANMELEFERNAERYEFLNWAQKAFNNYRAVPPATGI
VHQVNLEYIANVVHGIENENGEYEAFPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAGML
GQPSYFPAPDVIGVKFTGSFPNGTTATDLALKVTQVLREKNVVGKFVEYFGPGLKDMPLA
DRATISNMAPEYGATCGFFPVDEESLNYLKLTGRTQEQIDLVEKYCKLNNLWYSPDQEDP
NYTEIVEINLSKLEPNLSGPKRPQDLISLSNMKKEFNKAITAPAGNQGFGLHKSEFDKKA
VVEHPNGKSSVMKTGALAIAAITSCTNTSNPYVMLGAGLLAKNAVEKGLEVPEYVKTSLA
PGSKVVTRYLEDAGLTPYLDKLGFNLVGYGCTTCIGNSGPLREEIEQAIIENDLTVASVL
SGNRNFEGRIHPLVKANYLASPPLVVAYALAGTVDIDLKKDALGTDKDGNPVYMSDIWPS
MEDIKKQVEAVVQPEIFRKEYEDVFSSNERWNQIDTTDEPLFEWDSESTYIQNPPFFEGL
SKEPGTVEPLQNLRVVGKFGDSVTTDHISPAGAIAKDMPAGKYLQDKGVSPRNFNSYGSR
RGNHEVMMRGTFANIRIRNLIAPGTEGGFTTYWPTEEVVPIYDAAMKYQEEDTGLMVIAG
KDYGMGSSRDWAAKGTNLLGIKTVIAESFERIHRSNLVMMGVLPLQFKQGENADKFGLTG
KETYHVAVDESVKPHDLVKVTAVDESGKQVEFEAIARFDSDVEIDYYRHGGILQMVLRSK
LSVI
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggggaagagcaatacattgaatgcaaaaaagcaatttaaactcaatgacaaaacgtac
aattattatgaactaaaagctttagaagaagctggttttggaaaagtagcacgattacct
ttttcaatacgtgtgctgttagaatctttaattcgtcaacatgatgggcatcaaattaaa
gacgaacatgtagaaagattagcaaaatgggggacaaaagagggcgtaggagtagatgtg
cctttcaaaccatcccgtgttattttgcaagacttcactggtgtcccagccgtagtcgat
cttgcttcactaagaaaggctatggtagatatgggaggagagcctggagaaatcaatcct
gaagtacctgtagacttagttattgatcactctgtacaagtagatcaatatggtactgca
aatgcactaaaagctaatatggaattggaatttgaacgaaatgcagagcgttatgaattt
ttaaactgggcacaaaaagcatttaataattaccgtgcagttccacctgcaaccgggatt
gttcaccaagtgaacttggaatatatagctaatgtcgttcatggtatagaaaatgaaaat
ggcgaatatgaggcgtttcctgatacattagtaggtactgattcacatactacgatgata
aatggtctaggagtattaggatggggcgtgggaggtattgaagcagaagcaggtatgctt
gggcaaccttcgtactttcctgcacctgatgtaattggtgtgaaatttacaggtagtttt
ccaaatggcactacagcgactgatttagcattaaaagttacacaagtgttacgtgaaaaa
aatgtggtaggtaaatttgtagaatattttggtccaggtctaaaagatatgccattagct
gaccgagcaacgatctcaaacatggcgccagaatatggtgctacttgcgggttcttccca
gttgatgaagaatcattaaactatttaaaattaacaggtaggactcaagaacagattgat
cttgtagaaaaatactgtaaattaaataacctctggtattcaccagatcaagaagatcca
aattatacagaaattgtagaaattaatttatccaaattagaaccaaatctatccgggccg
aaacgtccgcaagatctcatttctttatctaatatgaaaaaagagtttaataaagcaata
acagcaccagctggaaatcaaggttttggattacataaatctgaatttgataaaaaagct
gttgtcgaacaccctaatggaaaatcttctgtaatgaaaacaggtgcgcttgcaattgca
gcaattacatcttgtacgaatacgtcaaatccttatgtaatgttaggggcagggttgctt
gcgaaaaatgctgtggaaaaaggtttagaagttccggagtatgtaaaaacttcgcttgca
cctggatcaaaagtagttacacggtatttggaagatgcaggtctaactccatacttggat
aaactaggttttaacttagttgggtatggttgtactacttgtattggtaactcagggcct
ctacgtgaagaaatcgaacaagcaattattgaaaacgatttgaccgtagcttctgtgtta
tctggaaaccgtaacttcgaaggacgtatccatccgttggtaaaagctaactatttagct
tcaccaccattggttgttgcttatgcacttgcaggtacagttgatattgatttgaaaaaa
gatgcattaggaacagataaagacggaaatccagtatacatgagtgacatttggccttct
atggaagatattaaaaaacaagtagaagcagttgtccaaccagaaattttccgcaaagag
tacgaagatgtatttagttccaatgagcgttggaatcaaattgatactacagatgaacca
ctgtttgagtgggatagtgagtctacgtatattcaaaatcctccattttttgaagggtta
tcgaaagaaccaggtactgtagagcctttacagaatttgcgagttgttgggaagtttggt
gattctgttacaacagatcatatttcaccagctggagcaattgcaaaagatatgccggca
ggaaaatatttgcaggataaaggtgtgtcacctcgtaatttcaactcatatggttcacgt
cgtggaaatcatgaagtgatgatgcgtggtacctttgcaaatattcgaatccgtaactta
attgcaccaggaacagaaggtggatttacaacatactggccaacagaagaagttgtgcca
atctatgatgctgccatgaagtatcaagaagaagatactggtcttatggtgattgcaggt
aaagactatggaatgggctcttctagagattgggctgcaaaaggaacaaatttattagga
atcaaaacagttattgctgaaagctttgagcgcatccatcggtcaaacttggttatgatg
ggagttcttcctttacaatttaagcaaggagaaaacgctgataaatttggcttaactgga
aaggaaacctatcatgtggcagtagatgaaagcgtaaaacctcatgatttggttaaagta
acagcagttgatgaatctggtaaacaagtagaatttgaagctattgctcgctttgacagt
gatgtagaaattgattattatagacacggtggtattttgcaaatggtgttacgtagcaag
ctaagcgttatttaa
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