Virgibacillus dokdonensis: A21D_03576
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Entry
A21D_03576 CDS
T05261
Name
(GenBank) recombinase A
KO
K03553
recombination protein RecA
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A21D_03576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpn03400
]
A21D_03576
DNA repair and recombination proteins [BR:
vpn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A21D_03576
RecFOR pathway proteins
A21D_03576
TLS (translesion DNA synthesis) factors
Other SOS response factors
A21D_03576
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecA
RecA_C
ATPase
Rad51
ATPase_2
AAA_24
AAA_16
AAA_25
CobU
AAA_22
AAA
ABC_tran
AAA_35
NPHP3_N
AAA_14
PT-HINT
DEAD
Motif
Other DBs
NCBI-ProteinID:
AUJ26610
UniProt:
A0A2K9J994
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Position
complement(3808659..3809699)
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AA seq
346 aa
AA seq
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MSDKKQALDAALKQIEKQFGKGSIMKLGEQAEQRIATIPSGSLALDVALGIGGYPRGRVV
EIYGPESSGKTTVALHAIAEAQQQGGQAAFIDAEHALDPTYARALGVNIEELLLSQPDTG
EQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAI
NKSKTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAESLKQGNDMVGNKA
RIKVVKNKVAPPFKQAEVDIMYGEGISKEGEILDIGSSLDIVQKSGAWYSYNEERLGQGR
ENAKQFLKENTDMQAEIHALIRQHYNLDDQPEEEETKEFNQESLDV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgataagaaacaagctttagatgcagcgttaaaacaaatagagaagcagtttgga
aaaggttccattatgaaattaggggagcaagctgaacaaagaattgcaacgatacctagt
ggttccttagctttagatgtagcacttggaattggtgggtacccaagagggcgggttgtt
gaaatatatggaccagaatcttctggtaaaacgaccgtagctttacacgctatagcagaa
gcgcagcaacagggggggcaagcagcatttatagatgcagagcatgcacttgatccaaca
tatgctcgtgctttaggcgtgaatattgaagagctattactctcgcaaccagatacagga
gaacaagctttagaaattgcagaagcactagttcgtagtggtgctgttgacattattgtt
gttgattccgtagctgcactcgttccgaaagctgaaattgaaggtgaaatgggagattcg
catgttggacttcaagctcgtttgatgtcccaagcattaagaaaactatctggtgctatt
aacaaatcgaagactacggctatttttattaatcaaattcgcgaaaaagtgggcgttatg
tttggtaatccggaaacgactcctggaggtcgtgcgctgaagttttactcatctgtacgt
ctggaagttcgccgtgctgaatcgttgaagcaaggaaatgatatggtaggaaacaaggca
agaattaaagttgtaaaaaacaaagttgcaccaccatttaaacaagcagaagtagatata
atgtatggagaaggtatttctaaagagggtgaaatactagacattggttctagcttagat
attgttcaaaaaagtggtgcttggtactcttataatgaagagaggcttggtcaaggacgt
gaaaatgccaagcagtttttgaaagagaacacagatatgcaggcggaaattcacgcatta
attaggcagcattataatttggatgatcaaccagaggaagaagaaacaaaagaatttaat
caagaaagtttagatgtgtaa
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