KEGG   Virgibacillus dokdonensis: A21D_03576
Entry
A21D_03576        CDS       T05261                                 
Name
(GenBank) recombinase A
  KO
K03553  recombination protein RecA
Organism
vpn  Virgibacillus dokdonensis
Pathway
vpn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vpn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    A21D_03576
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpn03400]
    A21D_03576
DNA repair and recombination proteins [BR:vpn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     A21D_03576
    RecFOR pathway proteins
     A21D_03576
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    A21D_03576
SSDB
Motif
Pfam: RecA RecA_C ATPase Rad51 ATPase_2 AAA_24 AAA_16 AAA_25 CobU AAA_22 AAA ABC_tran AAA_35 NPHP3_N AAA_14 PT-HINT DEAD
Other DBs
NCBI-ProteinID: AUJ26610
UniProt: A0A2K9J994
LinkDB
Position
complement(3808659..3809699)
AA seq 346 aa
MSDKKQALDAALKQIEKQFGKGSIMKLGEQAEQRIATIPSGSLALDVALGIGGYPRGRVV
EIYGPESSGKTTVALHAIAEAQQQGGQAAFIDAEHALDPTYARALGVNIEELLLSQPDTG
EQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAI
NKSKTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAESLKQGNDMVGNKA
RIKVVKNKVAPPFKQAEVDIMYGEGISKEGEILDIGSSLDIVQKSGAWYSYNEERLGQGR
ENAKQFLKENTDMQAEIHALIRQHYNLDDQPEEEETKEFNQESLDV
NT seq 1041 nt   +upstreamnt  +downstreamnt
ttgagtgataagaaacaagctttagatgcagcgttaaaacaaatagagaagcagtttgga
aaaggttccattatgaaattaggggagcaagctgaacaaagaattgcaacgatacctagt
ggttccttagctttagatgtagcacttggaattggtgggtacccaagagggcgggttgtt
gaaatatatggaccagaatcttctggtaaaacgaccgtagctttacacgctatagcagaa
gcgcagcaacagggggggcaagcagcatttatagatgcagagcatgcacttgatccaaca
tatgctcgtgctttaggcgtgaatattgaagagctattactctcgcaaccagatacagga
gaacaagctttagaaattgcagaagcactagttcgtagtggtgctgttgacattattgtt
gttgattccgtagctgcactcgttccgaaagctgaaattgaaggtgaaatgggagattcg
catgttggacttcaagctcgtttgatgtcccaagcattaagaaaactatctggtgctatt
aacaaatcgaagactacggctatttttattaatcaaattcgcgaaaaagtgggcgttatg
tttggtaatccggaaacgactcctggaggtcgtgcgctgaagttttactcatctgtacgt
ctggaagttcgccgtgctgaatcgttgaagcaaggaaatgatatggtaggaaacaaggca
agaattaaagttgtaaaaaacaaagttgcaccaccatttaaacaagcagaagtagatata
atgtatggagaaggtatttctaaagagggtgaaatactagacattggttctagcttagat
attgttcaaaaaagtggtgcttggtactcttataatgaagagaggcttggtcaaggacgt
gaaaatgccaagcagtttttgaaagagaacacagatatgcaggcggaaattcacgcatta
attaggcagcattataatttggatgatcaaccagaggaagaagaaacaaaagaatttaat
caagaaagtttagatgtgtaa

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