Virgibacillus dokdonensis: A21D_03604
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Entry
A21D_03604 CDS
T05261
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vpn
Virgibacillus dokdonensis
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpn03016
]
A21D_03604 (truB)
Enzymes [BR:
vpn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A21D_03604 (truB)
Transfer RNA biogenesis [BR:
vpn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A21D_03604 (truB)
Prokaryotic type
A21D_03604 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AUJ26638
UniProt:
A0A2K9J3W0
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All DBs
Position
complement(3841164..3842057)
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AA seq
297 aa
AA seq
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MHGILPLWKPRGLTSHDCVIKIRKMFQTKKVGHTGTLDPDVEGVLPICIGKATKIVPFLT
NTKKVYVAKLKLGAATDTEDASGEIVEEKVVNVMPLQKEIEEVCLQFTGEIKQTPPMYSA
VKVKGKKLYEYARENQYVERPVRTVSIEEISLLSPPDNKEHTISFRVVCSKGTYIRTLCV
DIGKALGYPAHMVSLVREATGAFSNKNAVTFATIEGAILNQRTANILYPLQFGLTHLDIW
NVDQEVAQKVLYGQKLPCNVQFKTDPFVVVHNNCVLAIYEVYDKQTGYVKPVRVFSR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
ttgcatggaattttgccattatggaaaccaagaggtcttacctcacatgattgtgtaatt
aaaattcgcaaaatgtttcaaacaaagaaagttggacacacaggtacgttagatccagat
gtggaaggggtcttacctatctgtattggaaaagcaacaaagattgttccttttttaaca
aatacgaaaaaggtatatgtggctaagcttaagttaggagctgctacagatacagaagat
gcttcaggtgagatagtggaggagaaagtggttaatgtgatgccacttcaaaaggagatt
gaagaagtatgccttcagttcactggagaaattaaacaaacccctcctatgtattcagct
gttaaggtaaaagggaagaaattgtatgaatacgctagagaaaatcaatacgtagaacgt
ccagtgcgaacggtaagcattgaagaaataagtttactatcgcctccagacaacaaagaa
catactatatcttttcgcgttgtctgttcaaaaggaacctatattcgtacattatgtgta
gatataggtaaagccttaggataccctgcacatatggtttcattggttagagaagcaaca
ggagcattttctaacaaaaatgcggttacatttgctacaatagaaggggctattttaaat
caacgtacagcaaacatcctatacccacttcaattcgggttaacacatttagatatatgg
aatgtagatcaagaagtagcccaaaaagttttatatggacaaaagcttccttgcaacgtc
caatttaaaacagacccatttgttgttgtgcacaacaactgtgtactagccatttatgaa
gtgtatgacaaacaaactggttatgtaaaacctgtccgtgtatttagtagataa
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