Virgibacillus dokdonensis: A21D_03661
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Entry
A21D_03661 CDS
T05261
Symbol
sucD
Name
(GenBank) Succinyl-CoA ligase [ADP-forming] subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00020
Citrate cycle (TCA cycle)
vpn00640
Propanoate metabolism
vpn00660
C5-Branched dibasic acid metabolism
vpn00720
Other carbon fixation pathways
vpn01100
Metabolic pathways
vpn01110
Biosynthesis of secondary metabolites
vpn01120
Microbial metabolism in diverse environments
vpn01200
Carbon metabolism
Module
vpn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
A21D_03661 (sucD)
00640 Propanoate metabolism
A21D_03661 (sucD)
00660 C5-Branched dibasic acid metabolism
A21D_03661 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
A21D_03661 (sucD)
Enzymes [BR:
vpn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
A21D_03661 (sucD)
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Gene cluster
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AUJ26695
UniProt:
A0A2K9J4R7
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All DBs
Position
complement(3897460..3898362)
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AA seq
300 aa
AA seq
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MSVYVNKDTKVIVQGITGGTAKFHTKQMLEYGTKIVGGVTPKKGGTEVEGVPVFNTVLEA
VEATGATASVIYVPAPFAADAILEAVDAELDLVICITEHIPVMDMVKVKRYMEGKNTRLV
GPNCPGVITADESKIGIMPGYIHKKGHIGVVSRSGTLTYEAVHQLSEAGYGQTTAVGIGG
DPVNGTNFIDVLEAFNNDPETYAVMMIGEIGGTAEEEAAEWVKANMKKPVVGFIGGATAP
PGKRMGHAGAIISGGKGTAEEKIRIMNECGIKVAETPAVMGETMIGVLEEKGLKEKCKTQ
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtatacgttaataaagatacaaaagtaattgtccaagggataaccggtggcaca
gctaaatttcatacgaaacaaatgcttgaatacggcacaaaaattgttggtggagtcact
ccgaaaaaaggtggtacagaggtagaaggtgtacctgtttttaatacagtattagaggct
gtagaagcaacaggtgctacagcttccgtcatctatgtaccggccccgtttgctgcagat
gctattctagaagctgttgacgctgaattagatttggttatttgtataacggagcatatt
ccggtaatggatatggtgaaagtaaaacgttatatggaaggaaagaatacacggctcgta
ggaccaaactgtccaggggttattactgctgatgaaagtaaaattggaattatgcctggc
tatattcataaaaaaggtcatattggcgttgtctctcgttcaggaacattaacatatgaa
gcggttcatcaattatcagaagctggatatggtcaaactaccgctgttggtatcggtggt
gatcctgttaatggaaccaatttcattgacgtgctagaagcatttaataatgatccagaa
acgtatgctgttatgatgattggagagataggcggtacagcagaagaagaagcagctgaa
tgggtgaaagcaaacatgaagaagcccgtagttggttttattggaggtgctacagctcct
ccaggaaaaagaatggggcatgctggcgctattatttcaggtggaaaaggaacagccgag
gaaaaaattcgcattatgaatgagtgtggaattaaagttgctgaaacgccagcagttatg
ggtgaaacaatgataggtgtgcttgaagaaaaaggcttaaaagagaagtgtaaaacacaa
taa
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