Virgibacillus dokdonensis: A21D_03680
Help
Entry
A21D_03680 CDS
T05261
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vpn
Virgibacillus dokdonensis
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpn03019
]
A21D_03680 (rnc)
03009 Ribosome biogenesis [BR:
vpn03009
]
A21D_03680 (rnc)
03036 Chromosome and associated proteins [BR:
vpn03036
]
A21D_03680 (rnc)
Enzymes [BR:
vpn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
A21D_03680 (rnc)
Messenger RNA biogenesis [BR:
vpn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A21D_03680 (rnc)
Ribosome biogenesis [BR:
vpn03009
]
Eukaryotic type
90S particles
RNase
A21D_03680 (rnc)
Prokaryotic type
rRNA processing factors
A21D_03680 (rnc)
Chromosome and associated proteins [BR:
vpn03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
A21D_03680 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AUJ26714
UniProt:
A0A2K9J4T4
LinkDB
All DBs
Position
complement(3916035..3916718)
Genome browser
AA seq
227 aa
AA seq
DB search
MNVDQLEKQLGVRFYNPSLIVQAFTHSSYVNEHRDRVFSDNERLEFLGDAVLELGVSQYL
FRTNEKMPEGEMTKLRAAIVCEPSLASFARGLRFGAYILLGKGEEQTGGRDRDALLADVF
EAFLGALFLDQGFHTTIQFLEDYIFPKITNGAFSHAMDYKSQLQELIQQVKHRSVEYKIV
EERGPSHDKEFVAKAFIQGEVYGSGIGRTKKEAEQRAAKAALDKYKQ
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgaccaattagaaaagcaattaggcgttcgtttttacaatccctcattaatc
gtacaagcatttactcattcatcttatgtgaatgagcatcgtgatagagtattttcggat
aacgagaggctcgaatttttaggagacgctgtattagagcttggcgtatctcaatattta
tttcggacgaatgaaaaaatgcctgaaggggaaatgacaaagttaagagctgcaattgtt
tgtgaaccttctttagccagttttgcacgtggcttacggtttggagcgtatatcttacta
ggtaaaggagaagagcaaactggtggtcgtgaccgcgatgccctgctggcagatgttttt
gaagcatttttaggtgcgctttttttagatcaaggttttcatacaaccatacagttcctc
gaagactatatatttccgaaaataacaaatggtgctttttcgcatgcgatggattataag
agccaattacaagaattaattcaacaagtgaaacaccgttcagttgaatataaaattgtc
gaagaacgagggccatctcatgataaggaatttgtagctaaagcttttatacaaggtgaa
gtatacggatcaggaatagggcgtacaaagaaagaagctgaacagagggcagctaaagcc
gctttagataaatacaaacaatag
DBGET
integrated database retrieval system
