Virgibacillus dokdonensis: A21D_03738
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Entry
A21D_03738 CDS
T05261
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00470
D-Amino acid metabolism
vpn00550
Peptidoglycan biosynthesis
vpn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A21D_03738 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A21D_03738 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpn01011
]
A21D_03738 (murD)
Enzymes [BR:
vpn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
A21D_03738 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vpn01011
]
Precursor biosynthesis
Amino acid ligase
A21D_03738 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Mur_ligase
AlaDh_PNT_C
Pyr_redox_3
Phospholip_A2_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
AUJ26772
UniProt:
A0A2K9J485
LinkDB
All DBs
Position
complement(3981673..3983022)
Genome browser
AA seq
449 aa
AA seq
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MRKLKDFPYEHVLVLGLAKSGTAAATTLLEQGKKVRINDQNATESDANVKQLKEMGAELI
LGSHPIRVLDGIEVIVKNPGISYDNPIVAAAQQRGIPVITEIEIAGQLASGPIIGITGSN
GKTTTTTLTTEMLKQSEKPVKVAGNIGIVATEVAKNLHPNENLVLELSSFQLMGVEKFKP
KIAVLLNIFKAHLDYHKTWENYKQAKYNIFKNQTKDDFLVYNAEDKNLLKAIKLAKAQKI
PFSVKRKQSDGAWLDNEAIYFKEEKIMERKDIVLLGSHNYENILASVAAAKLSGATNEGI
QKVLSMFTGVKHRLQFVENHRERLFYNDSKATNCLATQKALSAFNQPIILLAGGLDRGNG
FDELLPYMQHVKAMVLFGETASKLENLGMKAQVSDIRVTKNVQTAVQEAYEISEPNDVIL
LSPACASWDQYRTFEERGDMFIQAVHTLV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaaattaaaagatttcccttatgagcatgttttagttttggggctagcgaaaagt
ggtacggcagccgcaaccacattacttgaacagggaaaaaaagtgcgaataaatgatcaa
aatgcaacagaatctgatgcaaatgtaaaacaattaaaagagatgggggcagagttaatt
cttggctcccatcctattcgtgttttagatgggatagaagtcatcgttaaaaaccctggt
atttcctatgataaccctattgttgcagcagcccaacaaaggggaatacctgtaataact
gaaattgaaatagcgggtcaattggcaagcggaccaattattggaataacaggttctaat
ggtaaaacaacgacgacgactttaactactgaaatgctaaagcaaagtgaaaaacctgtt
aaagttgcagggaatattggcattgttgcaactgaagtggcaaaaaatttgcatccaaac
gagaatcttgtactagagctatcatcttttcaattaatgggcgtcgagaaatttaaaccg
aaaattgctgtactacttaatatatttaaagcccatctagattatcacaaaacatgggaa
aactataaacaagcaaaatataatatttttaaaaaccaaacgaaagatgattttcttgtt
tataacgcagaagataaaaatttgttaaaggctattaaacttgcaaaagcgcaaaaaata
ccattttctgttaaaaggaaacagagcgatggggcttggcttgacaacgaagcgatctac
tttaaagaagaaaaaattatggaacgtaaggatattgtcttattaggatcgcataattac
gagaatattttagctagtgtagcagctgctaagttaagtggagcaacaaatgaaggaatt
caaaaagtgttaagtatgtttacaggtgtgaaacacagattacaatttgtagaaaatcac
cgtgagcgattgttttataatgattcaaaagctaccaattgtctagctacgcaaaaagct
ttatcagcctttaatcaacctattattctacttgcaggaggattagaccgtggtaacggt
tttgacgaactcctaccatatatgcagcacgtgaaagcaatggtattatttggtgaaact
gcttcaaaactagaaaatttgggaatgaaagcgcaagtttctgatattcgtgtaactaaa
aatgtgcaaacagcagtacaggaagcttatgaaatatctgaacctaatgatgtcatattg
ttatcacctgcttgtgcaagctgggatcaatatcgcacgtttgaagaaagaggagacatg
tttatacaagccgtgcatacattagtatag
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