KEGG   Virgibacillus dokdonensis: A21D_03743
Entry
A21D_03743        CDS       T05261                                 
Symbol
pbpB
Name
(GenBank) Penicillin-binding protein 2B
  KO
K08724  penicillin-binding protein 2B
Organism
vpn  Virgibacillus dokdonensis
Pathway
vpn00550  Peptidoglycan biosynthesis
vpn01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vpn00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    A21D_03743 (pbpB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vpn01011]
    A21D_03743 (pbpB)
Peptidoglycan biosynthesis and degradation proteins [BR:vpn01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   A21D_03743 (pbpB)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer PASTA PBP_dimer_2
Other DBs
NCBI-ProteinID: AUJ26777
UniProt: A0A2K9J4B9
LinkDB
Position
complement(3989052..3991256)
AA seq 734 aa
MRKNKTTHFMAGIFIILFVGIFLTLSGRFLYIQATAEIDGVSLEAWADKQRTTSYELPAE
RGKIFDNNGMTLAYDQTSYRMYAIVDETYSDGAEEPRHVKETEKTAKKLAPLLDMEEKDI
LARLQEGIDNDRFQVEFGKKGRDLSLQKKEEIEELHLPGVFFREESVRSYPNGTFASQII
GFAKEMDVKDKQESTTKQKMQGVTGIEKEMDKHLSGEDGYIAFQRDKYNKKLLDPKEIVK
KNEDGGNIYLTIDQKIQTLLEDTLTQVEKKYEPERISAVVMNPKTGEVIAMGNRPSYNPN
NPKNVENWYNDVVSTPFEPGSTMKMFTWAAAIEEGVYNGTEAYKSGRYQPNEQITPIRDH
NGGNGWGPISYNEGFERSSNVAASKLVWEKIGSDKYLEYLKAFHFDQKTNIDLPNEVIGK
ILYNWPAEKLTTAFGQGTTMTPMQQMKAATAIANDGKMVKPYIINKITSSNTEKPTKEKK
PDVVGDPISKETSQQVLKLLDQAVNGEHATGKDYRLKSYKVGGKTGTAQIPNPKGGYLTG
RENYIFSFLGMAPIDDPQLMMYVSVKQPKLGEKEDGSLERGSDPVAFIFKNVMENGLHYL
NIDPDKQESDQIKHIKIPELIGKSSETLKQELTKKGLRVTSVGKGKVVSSNVQKGDRVLP
NDHIIMITEKPKMPNIIGWSLRDALKLSSLLELKTETFGDGYVKTQSIKEGTAVKSKDYL
GIELELPNNKKNKD
NT seq 2205 nt   +upstreamnt  +downstreamnt
atgaggaaaaacaaaacaacgcattttatggcaggtatttttatcattctttttgtgggt
atatttttaacattatcaggaagatttctttatatacaagctactgcggaaattgatggg
gtttctttagaagcatgggctgacaagcaacgaacaacatcgtatgaactcccagcagag
cgcgggaagatatttgataacaacggaatgacacttgcctacgatcaaacaagctataga
atgtacgcaatagtcgatgaaacatattctgatggggcagaagaaccaagacatgttaag
gaaacagagaaaacagcaaaaaaattagctcctctattagatatggaggaaaaagacata
ctagctcgcttgcaggaagggatagataacgatcgcttccaagttgaatttggtaagaaa
ggtagagatttgtctttacaaaagaaagaggaaattgaggaacttcatttgccaggggtt
tttttcagggaagagtctgttcgctcatacccgaacggcacctttgcgtctcaaataatt
ggttttgcgaaagagatggacgtaaaggataagcaagaaagtactacaaagcaaaaaatg
caaggtgttacgggaattgagaaagaaatggataaacatttaagtggggaagatggttac
attgcttttcaacgtgataaatataataagaaactacttgatccaaaagaaatagtaaag
aaaaatgaggatggcggaaatatctatttaacgatcgaccaaaaaatacagaccttacta
gaagataccttaactcaagttgagaagaaatacgaacctgaacgtatttcagcagtagtg
atgaatcctaagactggagaggttatagcaatgggaaatcgtccaagttataacccaaat
aaccctaaaaatgtagaaaattggtataatgatgttgtatcgacgccatttgagcctgga
tctacaatgaaaatgtttacttgggcggctgcgatagaagaaggcgtttataatggaacg
gaagcatataagtcaggtcgctatcaacccaatgagcaaataacacctattcgtgatcat
aatggcggaaatggttggggacctatttcatacaatgaagggtttgagcgttcttctaat
gtcgccgcgtctaaacttgtgtgggaaaaaattggatctgataaatatcttgagtattta
aaagcctttcatttcgatcaaaagacaaatattgatctaccaaatgaagtgattggcaaa
atattatataattggccagcagaaaagttaactacagcatttggtcaaggtacaaccatg
actccaatgcagcaaatgaaggcggccactgctattgccaacgatggaaaaatggtaaag
ccttatattattaataagattacaagttctaatacagagaagccaacaaaagaaaaaaaa
ccggatgtggttggtgaccccatttctaaagaaacgtctcaacaagtgcttaagcttctg
gatcaggcagttaatggagaacacgcaactggtaaagattaccgattaaagagctataaa
gttggtggaaaaacagggacagcgcaaattcctaatcctaaaggtggttatttaacaggt
agagaaaattatattttttcctttttaggaatggcacccattgatgaccctcaattaatg
atgtatgtatctgttaaacaaccaaagttaggtgaaaaagaagatggatctttggaaagg
ggttctgacccggtagcatttatttttaaaaatgtgatggagaatggcttgcattattta
aacattgatccagataaacaagaatcagatcaaataaaacatataaaaatcccagaactc
atagggaagagttcagaaactctaaaacaagaattgacgaaaaagggtttacgtgtaacg
tcagttggtaaaggtaaagtcgtttcaagtaatgtacaaaaaggagatcgagtgttgccg
aatgatcatattattatgattacggaaaaacctaaaatgccaaacataatcggctggtca
cttcgcgatgctctaaaactgtctagtttgttagaattaaagacagaaacgtttggtgat
ggttatgttaaaacccaaagtattaaagagggaacagctgttaaatcaaaagattacctt
ggcatagagctggaactaccaaacaataaaaagaataaagattag

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