KEGG   Virgibacillus dokdonensis: A21D_03791
Entry
A21D_03791        CDS       T05261                                 
Symbol
pdhD_3
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
vpn  Virgibacillus dokdonensis
Pathway
vpn00010  Glycolysis / Gluconeogenesis
vpn00020  Citrate cycle (TCA cycle)
vpn00260  Glycine, serine and threonine metabolism
vpn00280  Valine, leucine and isoleucine degradation
vpn00310  Lysine degradation
vpn00380  Tryptophan metabolism
vpn00620  Pyruvate metabolism
vpn00630  Glyoxylate and dicarboxylate metabolism
vpn00640  Propanoate metabolism
vpn00670  One carbon pool by folate
vpn00785  Lipoic acid metabolism
vpn01100  Metabolic pathways
vpn01110  Biosynthesis of secondary metabolites
vpn01120  Microbial metabolism in diverse environments
vpn01200  Carbon metabolism
vpn01210  2-Oxocarboxylic acid metabolism
vpn01240  Biosynthesis of cofactors
Module
vpn_M00009  Citrate cycle (TCA cycle, Krebs cycle)
vpn_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vpn_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
vpn_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:vpn00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    A21D_03791 (pdhD_3)
   00020 Citrate cycle (TCA cycle)
    A21D_03791 (pdhD_3)
   00620 Pyruvate metabolism
    A21D_03791 (pdhD_3)
   00630 Glyoxylate and dicarboxylate metabolism
    A21D_03791 (pdhD_3)
   00640 Propanoate metabolism
    A21D_03791 (pdhD_3)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    A21D_03791 (pdhD_3)
   00280 Valine, leucine and isoleucine degradation
    A21D_03791 (pdhD_3)
   00310 Lysine degradation
    A21D_03791 (pdhD_3)
   00380 Tryptophan metabolism
    A21D_03791 (pdhD_3)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    A21D_03791 (pdhD_3)
   00670 One carbon pool by folate
    A21D_03791 (pdhD_3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vpn04147]
    A21D_03791 (pdhD_3)
Enzymes [BR:vpn01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     A21D_03791 (pdhD_3)
Exosome [BR:vpn04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   A21D_03791 (pdhD_3)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_oxidored HI0933_like FAD_binding_2 3HCDH_N AlaDh_PNT_C NAD_binding_8 Amino_oxidase UDPG_MGDP_dh_N FAD_binding_3 Thi4
Other DBs
NCBI-ProteinID: AUJ26825
UniProt: A0A2K9J539
LinkDB
Position
complement(4037975..4039381)
AA seq 468 aa
MVVGDFPIEVDTLVVGAGPGGYVAAIRAAQLGQKVTIADKGALGGVCLNVGCIPSKALIQ
AGHLAEQAHGNEEMGIKTENVSVDFSKVQEWKASVVNKLTSGVEGLLKGNKVDIVKGEVY
FVDKNTAKIMDEKNSQTYTFNHCIIATGSTPIEIPNFKFSDRVLDSTGALNLKEIPKKMV
VIGGGYIGTELGTAYANFGTEIVVLEGAKEILGGFEKQMSQVVKKRLKKKDVTIITEAMA
KGVEESKDGVKVTYEVKGKEETVEADYVLVTVGRRPNTEDIGLEQVGIEKDERGLIKIDN
QCRTNVDNIYAIGDIVAGPPLAHKASYEGKVAAEAISGEKAVIDYLSMPAVVFSDPELAT
VGYSEQEAKDAGFDVKAAKFPFAANGRALSLNDSDGFMKLITRKDDGLVIGAQIAGPNAS
DMISELGLAIEAGMTAEDIALTIHAHPTLGEITMEAAEVALGTPIHML
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggtagtaggagattttccaattgaagtagacacactcgttgttggagcaggtcctggt
ggttatgttgctgctattcgtgctgcacagttaggccaaaaagtaacaattgctgataaa
ggcgctttaggtggggtttgtttaaacgttggatgtattccatccaaagctttaatccaa
gctggacatttagctgaacaagctcatggaaatgaagaaatgggaattaaaacagaaaat
gtttctgttgacttttctaaagtccaagagtggaaagcaagtgtcgttaacaagctgact
tctggtgtggaaggcttgttaaaaggaaacaaagtggatattgttaaaggtgaagtatac
tttgtagataaaaacactgcaaaaattatggatgagaaaaattctcaaacatataccttt
aatcattgcattattgctacaggatcaacaccaattgaaatccctaactttaaattttca
gatcgagtattggactcgactggtgctttaaacctgaaagaaattccgaagaaaatggta
gttatcggtggcggatatattggtacggagcttggaactgcttatgcgaatttcggaaca
gaaattgttgttcttgaaggtgcgaaagaaatcttaggcggttttgagaagcaaatgagt
caagttgtgaaaaaacgtttgaagaaaaaagacgttacaattattacagaagcaatggct
aaaggtgtagaagaatctaaagacggtgtcaaagtaacgtatgaagtaaaaggtaaagaa
gaaaccgttgaagcagactatgtattagttacggttggccgccgtccaaatacagaagat
attggcttagagcaggttggcattgaaaaagatgaacgtggactaattaaaattgataat
caatgtcgcacgaatgttgataacatctatgcaataggtgatattgttgccgggcctcca
ttagcacataaagcatcctatgaaggaaaagttgctgcagaagctatcagtggagaaaaa
gctgtaattgattacttaagtatgcccgcagttgtgttctcagatccagaattggctacg
gtcggttattccgaacaagaagcgaaagatgctggatttgatgtcaaagctgctaaattc
ccatttgcagctaatggccgtgctctttcattaaacgatagtgatggatttatgaaacta
attactcgtaaggacgatggcctagtaatcggtgcacaaattgctggaccaaatgcaagt
gatatgatttctgaattaggtcttgcaattgaagctggtatgacagcagaagatatcgca
ttaacgatccatgctcatccaacattaggtgaaatcaccatggaagctgctgaagtagct
ctaggtacaccaattcatatgctataa

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