Virgibacillus dokdonensis: A21D_03824
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Entry
A21D_03824 CDS
T05261
Symbol
gmr
Name
(GenBank) Cyclic di-GMP phosphodiesterase Gmr
Organism
vpn
Virgibacillus dokdonensis
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_8
PAS
LexA_DNA_bind
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
AUJ26858
UniProt:
A0A2K9J4H8
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Position
complement(4069662..4071608)
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AA seq
648 aa
AA seq
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MPEQVEVFPMTQQMLDQLSDAVLIIDQYGGIVAGNDTADEILGVSSAVGEHIDQYLKCIS
LEESNQLTYITHVHKQMIEVTILHASEGDPYYFVKLVLVSKQMQEIREKLDTFATEHFKG
TILYVKKNGDIIDADAYSTHMFLYSKQELTSLSIHNLFPQVFEKRQLTKKQVFHELQGVT
KEGGLLFVELLQYDLNDTIGVCFLKDVTEQVTNKNRIEYLAYYDELTDLPNRYYFEYVLT
EAIENNEEQQFIVVYMIDLDYFKEVNDILGYAVGDELIRLCALQLKKFLHVDTFIARMSG
DKFVIMQIGMRNKRAVIEFAKKLIQAFKKPITINGYDIYTTVTIGISLFPHHGTTAEDLI
KHANSAMYESKNNQRNSYKIFESAISEKFQSTVTLESELRQAFKEDQLELHYQPQVDFKT
NEIIGMEALLRWNHPEKGYIAPSEYIGIAEKTGFIIEIGEWVLYQACKQNKKWQDQGYKP
ITISVNLSAIQFHQKKFLQKVEHILDQTGLSPTYLELEITETMAMTNEKTVLHTLRELQN
IGIPVSIDDFGTGYSSLKLLSLFPITKLKIDKIFMDQSHEENRMIVKSIIQLCHLLNLKV
VAEGVETEEQFAFLKAEQCDQLQGYYFSKALPSEEVEQLLLKKNNKAN
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacaagtggaagttttcccaatgacacaacaaatgcttgatcaattaagtgat
gcggttttgattatcgatcaatatgggggcattgttgctggcaatgatacagcagatgaa
attttaggtgtttcatctgctgtaggtgagcatatagatcaatatttaaaatgcatatct
ttagaagaatccaatcagcttacatatataacacatgttcataaacaaatgattgaagtt
accatattacatgcaagtgaaggtgatccttactattttgtgaagctagttcttgtttct
aaacaaatgcaagaaataagggaaaaactggacacgttcgccacggagcattttaaaggt
acgatactttatgttaaaaaaaatggggatataatagatgctgacgcttacagcacgcat
atgtttctttactcgaagcaagaactcacgtcgttatcgatacataacctttttccacaa
gtttttgagaagaggcaattaactaagaagcaagtgtttcatgaactgcaaggagtaacg
aaagaaggcggactgctttttgttgaattattacaatatgatttaaatgacaccataggc
gtttgtttcttaaaagatgtaacagagcaagtaacaaataaaaatcgaattgagtacctt
gcttattatgatgaattgacagacttgccaaatcgttattattttgaatatgtactaaca
gaagcaattgaaaacaatgaggaacagcaatttattgtggtttatatgatcgatttggat
tactttaaagaagttaatgacatacttggttatgcggtaggtgatgaattaatccgcctt
tgcgctctccaattgaaaaaatttttacatgtagatacattcattgcaagaatgagtgga
gataaatttgtcattatgcaaatagggatgaggaataaaagggcagtaattgagtttgct
aagaaactaattcaagcttttaagaagcctatcaccattaatggatatgatatctacaca
accgtaacaatcggaatcagcctatttcctcatcatggtactactgctgaagatttaata
aaacacgcgaattctgctatgtatgaaagtaaaaataatcaacggaacagctacaaaata
tttgaatcagctatttctgagaaatttcaatcgaccgtaacactagaaagtgaacttcgg
caagcatttaaagaagatcaactagagcttcattatcagccacaggtcgatttcaaaaca
aatgaaattataggaatggaagctctattgcgctggaaccacccagaaaaaggatatatt
gctcctagtgaatatataggtatcgctgagaaaaccggtttcattatcgaaattggtgaa
tgggtattatatcaggcttgtaaacaaaataaaaaatggcaagatcaagggtataaacca
attacaattagtgttaatttatccgctatacaatttcaccaaaaaaaatttttacaaaaa
gtagagcatattttagatcagactggattatcaccaacttatttggaattagaaataaca
gagacgatggccatgacgaatgaaaaaacagttttacatactttacgggagttgcaaaat
ataggaataccagtatcgattgacgattttgggactggctattcttctttaaagttgctt
agtttatttccaattacgaaattaaaaatagataaaatatttatggatcaaagtcatgaa
gagaaccgcatgattgtaaaatcaattattcaactatgccatttactgaatttgaaagtt
gttgcagagggagtagaaacagaagaacaatttgcctttttaaaggcggaacagtgcgac
caattgcaaggttactatttcagtaaagctttaccatccgaagaagttgaacagctgtta
cttaaaaagaacaataaagcaaattga
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