Virgibacillus dokdonensis: A21D_03857
Help
Entry
A21D_03857 CDS
T05261
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vpn
Virgibacillus dokdonensis
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpn03400
]
A21D_03857 (sbcC)
DNA repair and recombination proteins [BR:
vpn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A21D_03857 (sbcC)
Archaeal homologous recombinant proteins
A21D_03857 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
YabA
nSTAND_NTPase5
GTP_EFTU
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AUJ26891
UniProt:
A0A2K9J869
LinkDB
All DBs
Position
complement(4105027..4108119)
Genome browser
AA seq
1030 aa
AA seq
DB search
MRPIKLTMTAFGPYKDKEVIHFDELGNHRLFVIGGNTGAGKTTIFDAICFALYGAASGQD
RENNTMLRSDFAEDDVHTAVELLFELKGDQYRVLRQLGHVKKGNKTKTGERYEFFEVTND
GDIPCVDRQIVSEIDKKIEQLIGLTQDQFKQIVMLPQGEFRKLLTSQTENKEEILRRLFK
TETYQAIAERFRRKKSAAEEAFKQAEQEQKQYIMQIHTSLPIREDALLFQTLEQESYNMH
QVLRGLEEECRYYQWKIATDKQKYEHAYLAHDKKQKEFYGAKAINERFAELQQKQVRLKD
LEQREAEYQQKKQKLTQAEFAQGIVLLEQQRNDWLKEEERKERQLKNGKHHKQRVDEQLS
NVNKQLEAEEKREPEREEVRKKLDRLNDYLPIVEQIDEMKRQLMAMENQAKQAADALYAT
EQLLVKKKDKIDQMEKHMHELDQFVEKLPDKQEELNTMREQFRLVHEYRKLMEQQILLKK
EAKQKEKIAIQMKGHYNKLEQTWMDNQAVYLAAHLHEGEACPVCGSLDHPSKAIQQWEKV
TKEQLEKARREFERVDTAYRDVRGKLKANQENVRVKATELEKQHIASTNVKQKEEQLATV
GKKLNAEVERLRQARHQRGEKKLALEKLQSEYKALEAKQKEQQQLEQQLKLTLAQKQAAY
QERIQSVPESMRVLADLKEQIAKTATHLEQLKSAWEAIQKEQQKWKQEQTKVHSELTQVM
KQLDETVKKRENAVDQFLQALAKEGFSSEATYQKAKLPESERVALKQDLEQYYQSISSIR
EQVQELDAMLVGKEQLDVTVMQQDLHRLKETYELALSRWNESKQYEQEAKALKQSVQKVM
EKVTNYERQLQRVADLYDMIRGQNHRKVSFERYLQIEYLEQIIAAGNERLKELSNGQYAF
IRSDRQESYGRQSGLALDVYDAYTGQTRDVKTLSGGEKFNASLSLALGMSDVIQSFQGAI
SIDTMFIDEGFGTLDEEALNKAIDTLVDLQQSGRMIGIISHVQELKAIFPAVLEVTKSKD
GSSRTKFLIK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
ttgagaccgataaaattaaccatgactgcatttggtccatacaaggataaggaagttatt
cattttgatgaacttgggaatcatcgtttgtttgtaattggtggtaatacaggagcggga
aagaccaccatttttgacgcgatttgttttgcgttatatggcgctgccagtggccaagat
agagaaaataatacgatgcttcgaagtgattttgctgaagatgatgttcatacagctgtt
gaacttttgtttgaattaaaaggagatcagtatcgcgttttacgtcaattgggacatgtg
aaaaaagggaataaaacgaaaacgggagaacgatatgagttttttgaagtcacgaatgac
ggtgacataccttgtgtagatagacagattgtttctgaaattgataaaaaaatagaacag
ctaattggcctcacgcaagatcagtttaaacaaattgttatgcttccacaaggtgaattt
cgtaaattgttaacgtcgcaaacggaaaataaggaagaaattttgcgacgattgtttaaa
acggagacctaccaagccattgcagagcgattcaggcgaaaaaaatcagcagcagaagaa
gcgttcaagcaagcagagcaggaacaaaaacaatatataatgcaaattcatacttcctta
ccaatacgagaggacgccctacttttccaaacgttagagcaagaaagctataacatgcat
caagttttgcgcggtcttgaagaggaatgtcgctattatcaatggaaaatagcaacagat
aaacagaaatatgagcatgcatatcttgcccatgataaaaaacaaaaggaattttatgga
gcaaaggctataaatgaacgatttgcagaattacagcaaaagcaagtacgtttaaaagac
cttgaacaacgagaagcggaatatcaacaaaaaaagcaaaaacttacgcaagcggaattt
gcacaaggaattgttctgttggagcaacagagaaatgattggctaaaagaggaagaaaga
aaagaacgacaactaaaaaatggaaaacaccacaagcagcgtgtcgatgaacaattaagt
aatgtaaacaaacaattagaggctgaagaaaaacgtgaacctgagcgagaagaggttcgg
aaaaagctagatagattaaatgattatttacctatcgtggaacaaattgatgaaatgaaa
cggcagttaatggcgatggaaaaccaagctaagcaagcagctgatgccctttatgctaca
gaacaacttttggtgaagaaaaaggacaaaatagatcaaatggaaaagcatatgcatgag
cttgaccaattcgtagagaagcttcctgataagcaggaagaattaaatacgatgcgtgag
caatttaggttagtacatgaatatcgtaaactaatggaacaacaaatcctgttaaaaaaa
gaagcgaagcaaaaagaaaaaatagctatccaaatgaaagggcattataacaaacttgaa
caaacatggatggataaccaagccgtttatttagctgcccatttgcatgaaggggaggca
tgtccggtttgtggaagcctagaccacccgagtaaagctatacaacaatgggagaaagta
acgaaagagcaattagaaaaagcgagaagagaatttgagagagtcgacacagcatatcga
gatgtacgtggtaagttaaaagcgaatcaagaaaatgttcgcgtaaaagcaactgaatta
gaaaagcagcatatagctagcacaaatgtaaaacaaaaagaggagcaacttgcaacagtt
ggtaaaaagctaaatgctgaggtagaaaggctaagacaagcacgtcatcaacgtggagaa
aagaagcttgcgcttgaaaaacttcaatccgaatataaagcattggaagcaaagcaaaaa
gagcaacagcaattggagcaacaattaaagttaacattagcacaaaagcaggcagcttat
caggaaaggatacagtctgtaccagagagcatgcgtgtacttgcagacttgaaagagcaa
attgctaaaacagccactcatttagagcaactaaaaagtgcatgggaagctatacaaaaa
gagcaacagaaatggaaacaggaacaaacgaaagttcattcagaactcactcaagtcatg
aagcagctagacgaaacggttaaaaagcgagagaatgctgttgaccaatttttacaagct
ttagcaaaggaaggtttttcctcagaagccacctatcaaaaagcaaaattgcctgaatct
gaacgggtagcattgaaacaagatttagaacaatactatcagtctatctcttctatacgt
gaacaggttcaagaattagacgctatgttagtaggtaaggagcagttagatgtaactgtt
atgcaacaggatttacatcgtttaaaagaaacgtacgaattagctttaagtagatggaat
gaatccaaacagtatgaacaagaagcaaaagcattaaagcaatcggtacaaaaagtaatg
gaaaaagtaacaaattatgaacgtcagttgcaaagagtagctgatttatatgatatgatt
cgaggtcaaaatcatcgaaaagtctcgtttgaacgttatttgcagattgaatacttagaa
caaattattgctgcaggaaatgagcggttaaaagaactgtcaaatgggcaatatgccttt
attcgtagtgatcgtcaagaatcatacgggagacaaagcggtcttgcccttgatgtatat
gatgcttatacaggtcaaacgagagatgtcaaaactttatcaggaggagagaagtttaac
gcttcacttagcttagcactcggaatgtccgatgtgattcaaagctttcaaggtgctatt
tcaattgatacgatgtttattgatgaaggttttggtacgctcgatgaagaggcattgaat
aaagcaattgatacgttagtcgatttgcagcaatcaggaagaatgattggcatcatttct
catgtgcaagaattaaaagcaatttttccagctgtgcttgaagtaacgaagtccaaagac
ggttctagcagaacaaaatttttaattaaatag
DBGET
integrated database retrieval system
