Virgibacillus dokdonensis: A21D_03858
Help
Entry
A21D_03858 CDS
T05261
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vpn
Virgibacillus dokdonensis
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpn03400
]
A21D_03858 (sbcD)
DNA repair and recombination proteins [BR:
vpn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A21D_03858 (sbcD)
Archaeal homologous recombinant proteins
A21D_03858 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
DNA_pol_E_B
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
AUJ26892
UniProt:
A0A2K9J4K1
LinkDB
All DBs
Position
complement(4108166..4109347)
Genome browser
AA seq
393 aa
AA seq
DB search
MKFFHTADWHLGKLVQGVYMTNDQSYILEKFIQAVEEEQPDAVIIAGDLYDRAVPPTEAV
HLLDETLGKIVLELNIPVLAIAGNHDSPSRLDFGSKILRENGLHIAGNLSEPIRPVVLHD
AYGEVHVYLIPYCDPSIVRHVFGNDTVRTHNDAMKIIIQHIEASMDPNARHVFVGHAFVT
PYGEREANTSESERPLSIGGSEYVEADLFHSFHYTALGHLHQAHYVKRKEIRYAGSPLKY
SISEENHRKGFFIVNVDGEGEVEIEKQLLLPKREMRTVEGALDELLQLPMNEDYVFIKLT
DETPVLSPMEKLRSVYPNAMHVERKTFFTTPGASEKEKMVERTKMSDMELFEAFYKEVKG
EAPDEETVKLFQDTLHDLLTEQDDTKDATHTLQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttttcatacagcagattggcatcttggtaagcttgtgcaaggcgtatatatg
accaatgatcaaagctatattttagaaaaatttattcaagctgttgaagaggaacagcct
gatgctgttattattgcaggagatttatatgatcgagcagtaccgcctacagaagctgta
catttattagatgaaacgttaggtaaaatcgtcttagagctaaatataccggttcttgca
attgcgggtaaccatgatagtccaagcaggcttgattttggaagtaaaatattgcgtgaa
aatggtttgcatattgcagggaacctctcagaaccaattaggccagtagtcttacatgat
gcgtatggagaagtccatgtctacctcattccctactgtgacccaagtattgtacgccat
gtttttggtaatgataccgttcggacgcataatgatgccatgaaaataattattcaacat
atagaagcatccatggatccaaatgccaggcatgtatttgtaggacatgcttttgtgacc
ccttatggggaaagagaggcgaatactagtgaatcagaaagaccgttgtctataggagga
tctgaatacgtagaagctgatttgtttcatagctttcactatactgccttaggtcacctt
catcaagcgcattatgtcaaaagaaaagagattcgttatgcaggttctcctttaaaatat
tcgatctctgaagaaaatcatcgcaaaggtttttttattgtgaatgtagatggggaaggt
gaagtagaaattgaaaaacagctactcctaccgaaaagagaaatgcgaacagtggaaggc
gcattagatgagcttttacaactaccaatgaatgaagactatgtgtttattaaactgaca
gatgaaactcctgtcttatcaccgatggaaaaactccgctctgtgtatccaaatgcaatg
cacgttgagaggaaaacgtttttcacaacgcctggtgcttctgagaaggaaaaaatggta
gaacgaacaaaaatgtcagatatggaactgtttgaagctttttataaagaagtgaaagga
gaggctccagacgaggagaccgtaaaattgtttcaagataccttgcatgatctgttaaca
gaacaagatgatacaaaagatgccactcatacacttcaataa
DBGET
integrated database retrieval system
