Vanderwaltozyma polyspora: Kpol_1004p2
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Entry
Kpol_1004p2 CDS
T01049
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
vpo
Vanderwaltozyma polyspora
Pathway
vpo03022
Basal transcription factors
vpo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vpo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Kpol_1004p2
09124 Replication and repair
03420 Nucleotide excision repair
Kpol_1004p2
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpo03021
]
Kpol_1004p2
03400 DNA repair and recombination proteins [BR:
vpo03400
]
Kpol_1004p2
Transcription machinery [BR:
vpo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Kpol_1004p2
DNA repair and recombination proteins [BR:
vpo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Kpol_1004p2
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
DUF1451
Motif
Other DBs
NCBI-GeneID:
5545872
NCBI-ProteinID:
XP_001645488
UniProt:
A7TJ61
LinkDB
All DBs
AA seq
497 aa
AA seq
DB search
MSPTVRSDSDNDDNENVLVNSTHNRKLKKGVHFTHDEDDEDGIIKKKNKDQNTVRVNDYS
KRSNFDEQPKRQNEADDDDDKVKSSNRSHPDRKSKKKKISNDKLQGVSGGYSWEDELKRS
WDLVTVDEEGDMTALVASLVEARKKRAAQKVVTPYQRGIIRSLILVLDCSEAMAEKDLRP
NRNVMSIQYAIDFTHEFFDQNPISQLGIVIMKNGLAQLLTPVSGNPQEHIDALKSIRRQE
PKGNPSLQNALEMARGLLLPVPAHCTREVLIVFGGLSSTDPGDIHQTIQSLVEEKIRVKV
IGLSAQVAICQELCKATNYNDDSFYRIILDETHFKELFDEAVTPLPVNKINKGFTLVKMG
FPTRVFEDSPSFCACHSKLVYGGYFCPNCQNKVCSLPIVCPCCDLMLILSTHLARSYHHL
MPLKTFSEVPHTENFPTDNCFSCQIRFPVLRNQKTGELLTSSRYRCTDCKQDFCIDCDVF
IHEVLHNCPGCEAKAIV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagtccaactgttagatcagattctgataatgacgataatgaaaatgttctggtaaat
tcaactcacaataggaaacttaaaaaaggtgttcatttcacccatgatgaagacgatgaa
gatggtatcattaaaaagaaaaataaagatcaaaatacggttagggtaaacgattattca
aaacgttcaaactttgatgaacaaccaaaaagacaaaatgaagcagatgacgatgatgat
aaggtaaagtcatctaacaggtctcatcctgatcgaaagtctaaaaaaaagaagatatcc
aatgataaactacaaggtgtaagtggtggttattcttgggaagatgaactaaagagaagt
tgggatttggtgactgtagatgaagaaggtgatatgaccgccttggttgcaagtctcgtt
gaagcaagaaagaaaagagcagcgcaaaaagttgtaacgccatatcagagaggtatcatt
agatctttaatcttagtcttggactgtagcgaagcaatggcagaaaaggatttaagacca
aatcgaaatgtcatgagtatacaatacgcaattgacttcactcatgaattttttgatcaa
aatccaatttctcaactaggtatagttattatgaaaaatggtctggctcaattactaact
ccagtaagtggtaatccacaagaacatattgatgctttgaaatcaataagaagacaagaa
cctaaaggcaacccatctttacaaaatgcattagaaatggcaagagggttgttattacca
gtccctgcacattgtacacgggaagttttgatcgtatttggaggtttatctagtaccgat
cctggtgatattcatcaaactattcaatctttggtggaggaaaagattcgtgtgaaagtt
attgggttatctgcacaagtagctatatgtcaagagttatgtaaagctaccaattataat
gacgattctttttacagaattattttagacgaaactcattttaaagaactatttgatgaa
gccgttacaccactaccggtaaataaaattaataaaggttttactttggttaaaatgggt
tttcctacaagagtttttgaagattctccatctttctgtgcatgccattcaaaactagtt
tatggtggttatttttgtccaaattgtcaaaataaagtttgttcattaccaatagtatgt
ccatgttgtgacctgatgttgatcttatcaacccatttagcacgttcatatcatcatcta
atgccattaaagacattctctgaagttcctcatacagaaaattttccaacagataattgc
tttagttgtcaaattcgttttcctgttctaagaaatcaaaaaactggtgaattattgaca
agttcacgttatagatgtactgattgtaaacaggatttttgcattgactgtgatgtattc
attcatgaagttttacataattgccctggatgtgaagccaaggctatagtttga
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