Vanderwaltozyma polyspora: Kpol_1005p15
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Entry
Kpol_1005p15 CDS
T01049
Name
(RefSeq) hypothetical protein
KO
K03679
exosome complex component RRP4
Organism
vpo
Vanderwaltozyma polyspora
Pathway
vpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Kpol_1005p15
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpo03019
]
Kpol_1005p15
Messenger RNA biogenesis [BR:
vpo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Kpol_1005p15
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Kpol_1005p15
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
5542960
NCBI-ProteinID:
XP_001642785
UniProt:
A7TS41
LinkDB
All DBs
AA seq
365 aa
AA seq
DB search
MSEVISVVKRRGGFQYPSIVDETNDIDTSDEDIEMEDVEKPAGDKKTDAAEGEIVTPGEL
VTDDPIWMRGHGTYFLDNMTYSSVAGTISRVNRLLSVIPLRGRYSPETGDHVIGRITEVG
NKRWKVDIDGKQNAVLMLGSVNLPGGILRRKSESDELQMRSFLKEGDLLNAEVQSLFQDG
SASLHTRSLKYGKLRNGLFLQVPSSLIIRSKNHTHNLPGNVTVLLGVNGYIWLRKTSQMD
QARDLPPGGSTGGYPSNSGPTGAKSLNPSSNMSITRLEEESSWQIYSDENDPTITNSIRQ
TISRYANVIRALAYCEIGITQERIVSAYEASMAYPNIGSLIERDVMESIGNDVINGEKMR
GNGGN
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggttattagtgtggtgaaaagaagaggtggatttcaatatccatccattgtt
gatgaaactaatgatatagatacttctgatgaagatatcgaaatggaagatgttgaaaaa
ccagcaggtgataagaaaacagatgctgccgaaggtgaaattgttactcctggtgaattg
gttactgatgatccaatttggatgagaggtcatggtacctatttcttggataatatgact
tattcttctgttgctggtaccatctctagagttaatagattattgtcagttataccatta
agaggtcgttactcaccagagactggtgatcatgttatcggtagaattacagaagttggg
aacaaaagatggaaagttgacatcgatggtaaacagaacgctgtgttaatgttgggttct
gtcaatttacctggtggtatattaagaagaaaatcagaaagtgatgaattacaaatgaga
agtttcttgaaagaaggcgatttattgaatgcagaggtacagtctttattccaggatggt
agtgcttctttacataccagatctttaaaatatggtaaattaagaaacggtttgttctta
caagtaccaagttcattaattatcagatctaaaaatcatactcataatcttcctggtaat
gtaactgttttattaggtgttaacggttacatttggttaaggaagacttcacaaatggat
caagccagagatctcccaccaggtggtagtacaggtggttatccatcaaattctggacca
actggtgctaaatctttaaacccgtcaagtaatatgtcaatcacgagattggaagaagag
tcttcatggcaaatttattccgatgaaaatgatcctacaattacaaatagcataaggcaa
acaatctctagatacgccaacgtaataagagctttagcttattgtgagataggtataact
caagaacgtatcgttagtgcgtatgaagcaagtatggcatatccaaatattggttcgtta
atagagagagatgttatggaatccattggtaatgatgttattaatggtgaaaagatgaga
ggtaacggcggtaattaa
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integrated database retrieval system
