Vanderwaltozyma polyspora: Kpol_1007p10
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Entry
Kpol_1007p10 CDS
T01049
Name
(RefSeq) hypothetical protein
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
vpo
Vanderwaltozyma polyspora
Pathway
vpo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vpo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Kpol_1007p10
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vpo03041
]
Kpol_1007p10
Enzymes [BR:
vpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Kpol_1007p10
Spliceosome [BR:
vpo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
Kpol_1007p10
Complex C
U5 SnRNP specific factors
Kpol_1007p10
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
5543067
NCBI-ProteinID:
XP_001642884
UniProt:
A7TRT2
LinkDB
All DBs
AA seq
605 aa
AA seq
DB search
MARPANINQLLSSIKKGKNNEAPSDSNNDAYKVVKPKFLDKAKREKINEQNQLPEAKNGD
ISKYNIVIGNKKSRQVDDGVRNNNDIRLVDNEKQSSKFQFNWNEQEDTLSNYNPIVGTSV
SDLIKNNGNKHSKKLDSFEHAYMGKHWKEKSLSEMSERDWRILSEDYHITTKGGNILHPM
RNWDELGLIPNDLLEVLKNKLNFISPSPIQRISIPNICQKNGHSTNRDLMGIASTGSGKT
LAFVIPILIKLLGTAIRPLSLKVIEGPKALILAPTRELAQQIQAEIKKILSLSSNELTKI
TSICIVGGHSIEEISYDLSKGCDILVATPGRLIDCLESHLIVIDNVNTIVLDEADKMIDF
GFEDQVTTILSKLQINEMKDNLQKIMFTATMTPTIERIANGYLRNASYVSIGNSEEFVPH
INQLVYYSPNENSKFRKLKQVLELYPPPVIIFINYKKTADWLATKLQEETNFKVTTLHGS
KSQDQREYSLNLLRTGRVQIMIATNVAARGIDIPNVGLVVNYQISDSFEDYIHRIGRTGR
AGKEGTAISFVGDDEDPKVIIELFKYMTKKDKESKNKPVDNRFDDLIKQKYNLNKLLSSK
DNIIH
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggctagacctgctaacattaatcagttattaagttctatcaaaaagggtaaaaacaat
gaagctccatccgattctaacaatgatgcttataaagtggttaagccaaagtttctagat
aaggctaaaagagagaagataaatgagcagaatcaacttccagaagctaagaatggtgat
atttctaagtataacattgtgattggcaataagaagagtagacaagttgatgatggtgtt
agaaataacaatgatattcgactagtcgataacgaaaaacaatcttcgaaatttcaattt
aactggaatgagcaagaggatactctttcaaactataatccaattgtaggcaccagcgtg
tctgatttgataaaaaataatggtaataaacattctaagaaactagattcttttgaacat
gcttatatggggaaacactggaaggaaaagtctttatcagaaatgtctgagagagattgg
agaatattgagcgaagattatcatataactacaaaaggtggtaatatattgcatcctatg
agaaactgggatgaacttggactaataccaaacgatcttttggaagtactaaaaaataaa
ttaaactttatatctccttcaccaattcagaggatatcaattccaaatatttgtcaaaaa
aatggacattcaaccaatagggacctcatgggtattgcttcaactggttctggtaaaact
ttagccttcgttattcccattttaataaaattgcttggaacagctatcagacctttatca
ttaaaagtaatagaagggccaaaagctttgatccttgcaccaacaagagagttggcacaa
caaatacaggctgaaattaaaaaaattctttctttgtcatcaaatgagttaacaaaaatt
actagcatatgtattgttggtggccattcgattgaggaaatttcatatgatctttctaaa
ggctgtgatattctagttgccacgcctggtagattgattgattgtttggagtcacattta
atcgtgattgataatgtaaacacaatagttttggatgaggctgataaaatgattgatttt
ggatttgaagaccaagtaactacaattttatcaaaattacagataaatgaaatgaaagac
aatttgcaaaaaattatgttcacagctaccatgacacctacaattgagcgaattgccaat
gggtatcttcgtaatgcatcatatgtatcaattgggaattcagaagaatttgtacctcat
attaaccaactagtgtattattctcctaatgaaaattccaaatttcgtaaactaaaacaa
gtgcttgaactttacccacccccagtcataatattcatcaattataaaaaaactgcagat
tggctagcgacaaagctccaggaagagactaattttaaagtaacaactttacatggttct
aaatcacaagatcaaagagaatattcactgaatctattgcggacaggaagagttcaaatt
atgatagctaccaatgtggcggctagaggtatcgatatacccaatgttggtctggtagtt
aattatcaaatctctgatagttttgaggattatatccacagaattggtagaactggtaga
gcaggaaaagaaggtactgcgatttcatttgttggagatgacgaagatccaaaagttatt
atcgaactgttcaaatatatgacaaagaaggataaggagagtaaaaataaacctgttgat
aacaggtttgacgatctcattaaacaaaaatataatttgaacaaacttttatcaagtaag
gacaacataattcattaa
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