Vanderwaltozyma polyspora: Kpol_1010p39
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Entry
Kpol_1010p39 CDS
T01049
Name
(RefSeq) hypothetical protein
KO
K11600
exosome complex component RRP41
Organism
vpo
Vanderwaltozyma polyspora
Pathway
vpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Kpol_1010p39
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpo03019
]
Kpol_1010p39
Messenger RNA biogenesis [BR:
vpo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Kpol_1010p39
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
Kpol_1010p39
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
5546179
NCBI-ProteinID:
XP_001645781
UniProt:
A7TII5
LinkDB
All DBs
AA seq
246 aa
AA seq
DB search
MSRFELYSPEGLRLDGRRWNELRRFECSINTHAHASDGSSYLEQGNNKIVTLVKGPQEPI
LRSQLDATKASLNITVNITKFSKMERSKSSHKNERRVLEMQTALVRTFEKNVMLHLYPRT
LIDIEIHVLQQDGGILGSLINSITLALIDSGIAMYDYVSAISIGLYDTTPLLDVNTLEEN
AMSTVTLGVIGKSEKLSLLSVEDKIPLDRLESVLAIGIAGAHRVRELMDNELRKHAAHRV
AKSSAK
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagatttgaattgtactccccagagggattaagattagatggtcgtagatggaat
gaacttcgtcgattcgaatgttcaattaatacccatgcacatgcatcagatggttcatca
tatttggaacaaggtaataataagattgttactttggtgaagggtcctcaggaaccgatt
ttgcgttcccaattagatgctacaaaggcctcattgaatatcacagtaaatattacaaaa
ttttccaagatggagagaagtaaatcaagtcataagaatgaaagacgtgtattagagatg
caaactgcattagttcgtacttttgaaaaaaatgttatgttacatctttatccaagaact
ttaatagatattgaaatccatgttttacaacaagatggtggtatattaggttctttaatc
aatagtatcactttagcattgatcgattctggtatagctatgtatgattatgttagtgct
atttccattggtttatatgatacaactccattattagatgtaaatactttggaagaaaat
gcaatgagtacagtcactttgggtgtcattggtaaaagtgaaaaattgtcacttctttct
gtggaagataagatcccattggatagattagaaagtgtattagctataggtatagcgggt
gcccatagagtgagagaattgatggacaatgagttaagaaagcatgctgcccatagagta
gcaaaatcttctgcaaaataa
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