KEGG   Vanderwaltozyma polyspora: Kpol_1010p42
Entry
Kpol_1010p42      CDS       T01049                                 
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
vpo  Vanderwaltozyma polyspora
Pathway
vpo03018  RNA degradation
vpo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vpo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Kpol_1010p42
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Kpol_1010p42
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vpo03019]
    Kpol_1010p42
   03041 Spliceosome [BR:vpo03041]
    Kpol_1010p42
Messenger RNA biogenesis [BR:vpo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Kpol_1010p42
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     Kpol_1010p42
Spliceosome [BR:vpo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    Kpol_1010p42
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 5546182
NCBI-ProteinID: XP_001645784
UniProt: A7TII8
LinkDB
AA seq 109 aa
MSPLLKDYLNKKIVIITTEGRCLLATLEGFDKNTNLVLSQVHDRFGSSGVVQAVQLLRGS
EVVSCGLLDDGYDEADDLSNESVTPLKDTKNRIEDEYAIWEKIRCVSGR
NT seq 330 nt   +upstreamnt  +downstreamnt
atgtcgccattattgaaagattacttgaacaagaagatagttatcatcacaactgaggga
cgatgcttattggcaactttagaaggtttcgataagaatacgaatctggtcttgtctcag
gtccatgatcggtttggttcttccggtgtagtacaggcagttcaattgcttcgaggcagt
gaagtggtttcctgtgggcttctagacgatgggtatgatgaagctgatgatttaagtaat
gaaagtgttacacctttgaaagacaccaagaatagaattgaggatgagtatgccatttgg
gagaaaatacgatgtgttagtggtcgttga

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