Vanderwaltozyma polyspora: Kpol_1028p8
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Entry
Kpol_1028p8 CDS
T01049
Name
(RefSeq) hypothetical protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
vpo
Vanderwaltozyma polyspora
Pathway
vpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Kpol_1028p8
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpo03019
]
Kpol_1028p8
Messenger RNA biogenesis [BR:
vpo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Kpol_1028p8
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
Kpol_1028p8
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
5547053
NCBI-ProteinID:
XP_001646594
UniProt:
A7TFX9
LinkDB
All DBs
AA seq
427 aa
AA seq
DB search
MQSMNVQPQVFPVGGGQFFNQHQMNEPQGNLGNNNPHIFSPQVNQARLLAQQHPVSGEVP
GLHLMNNGQDMTGNYILKQKMENVQGQQQGQQQFNVNANVGQNMPPGLNVYQQGAPGLVR
PLNSQMPKQMGVTANTPVQANAMMHTMLPPPNQLFIREVWKGNLHSEFSLLRRMIQQYNQ
VSISTEFVGTLARPIGNFRSKTDYHYQTMRSNVDLLNPIQIGISISDINGKKPENGPSTW
QFNFSFDITNEMVSGESLELLRKSGINFETHKSNGIEIFEFAQLMMDSGLILDKSITWIT
FHAAYDFGFLIHLLMNDVMPNNMKDFEWWVNKFIPNFYDVNLIYKVITDFKQQMQSQQQQ
QQQPQLTLMSLSDELGFPRFPLFTTTGGQSLLTLLVFSQLRNLSMHKLPNGADFTTYKNL
MYGINSE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcaatgaatgtgcagccccaagtgttcccggtaggcgggggtcagtttttcaat
caacatcaaatgaatgaaccacaaggtaatctgggtaataataatcctcatattttttca
ccacaagtcaatcaagctaggttgcttgctcaacaacatcctgtttctggagaagttcct
ggattacatctaatgaataatggtcaagatatgactgggaattatattttgaaacaaaag
atggagaacgtacaagggcaacaacaaggacaacaacaattcaatgtcaacgccaatgtt
ggccaaaatatgcctcctggtttgaatgtttatcagcaaggagctcccggtttagtaaga
cctttaaattcacaaatgcccaaacaaatgggtgtaacggccaacacaccagttcaagcc
aatgctatgatgcatacaatgttacctcctccaaaccaattgtttatacgtgaagtttgg
aaaggtaatttgcattcagagttttcccttttacgaagaatgattcaacaatacaatcaa
gtttccattagcacagaatttgttggtaccttagcaagaccaataggtaatttcagatca
aagacagattatcattatcaaacaatgagatccaacgttgatttgttgaacccaatacaa
attggtatatctataagcgatattaacggtaagaagccagaaaacggaccctctacatgg
caatttaattttagttttgatatcaccaatgaaatggtttctggagaatcgctagaatta
ctaaggaaatcaggaataaattttgaaacacacaagagtaatggtatcgaaattttcgaa
tttgcccaattaatgatggattcagggttgattttagataaaagcatcacttggatcaca
ttccatgccgcatacgatttcggatttttaatccatctcctaatgaacgacgtgatgcca
aacaatatgaaagacttcgaatggtgggtcaacaaattcattccaaacttttacgacgtc
aatctaatttataaagtcatcaccgattttaaacaacaaatgcaatcgcaacaacagcaa
caacaacaaccacaactaacgctaatgtcactatccgacgaattagggttccctcgcttc
ccactattcacaactactggaggccaaagtttactaactctattggtattctcacaatta
cgtaatctatcaatgcataaattaccaaatggcgcagatttcacaacttacaaaaaccta
atgtacggcataaacagcgaataa
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