Vanderwaltozyma polyspora: Kpol_1036p59
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Entry
Kpol_1036p59 CDS
T01049
Name
(RefSeq) hypothetical protein
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
vpo
Vanderwaltozyma polyspora
Pathway
vpo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vpo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Kpol_1036p59
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpo03019
]
Kpol_1036p59
Messenger RNA biogenesis [BR:
vpo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
Kpol_1036p59
U7-dependent histone pre-mRNA processing factors
Kpol_1036p59
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
AFF4_CHD
Beta-Casp
UPF0728
Motif
Other DBs
NCBI-GeneID:
5547654
NCBI-ProteinID:
XP_001647172
UniProt:
A7TEK7
LinkDB
All DBs
AA seq
821 aa
AA seq
DB search
MTYTFRCCDDGSGYTVGTIVRFDNVTILIDPSWNGKNVSYADSIKYWSTIIPEVDIILLS
QPSLECLGAYSMLYYNFVSHFVSRIDVYATLPVSNLGRISVIEQYACAGIIGPYETNEMD
LEDIEKSFDNIKTVKYSQLVDLRSKFDGLTLVAYNSGVNAGGSIWCLLTYSEKLVYAPHW
NHTKDTILNGAALLDNTGKPLSTLMKPTAIITSLGRFGSALSFRKRSKNFNDSLKRGLSN
NGSIMIPVDITGKFLDLFVQVHNFLYENSKSGSYNQTHVLLIAYFRGKVLTYARSMLEWL
SSSLMKTWESRDNASPFDIGSKFKVIDPSEISNFPGSKVCFVSQVDILLNEVLTKLCSMN
KTTVLMTSTNTNNTQILETMYEKWEKAKTLQKLQDGSTISFTDTVLLKIASYKPLVNEQL
EEYNARLKERRDKCKETVEILKKEAKLGTRIGDMYRSEGVGLIHSLNDEEDEDEDEEEEN
ILNSTSSQTKSFTVPVDIKINRSATSKHKMFPFQPGRTKIDDYGSVVDFNMFIPEELNTE
IDTNKRPSSRTNEMDDDPYDLGDAQKITKRSRRGDRSKSQNENAVSIDNIQYLEADNNPT
IRTISENRSHINCTFTFMNLDSLVDTRSATVIWPSFKPRKILLLAEKVPQNTHIISTLQK
KDIEIVEMPSNVEQQFTTTIKALDISIDPELDQMLRWQKIGYGHTVAHVIGRLVKEKVQN
SKLQDDDKEPLRTKMVLKPMENRTKVHTGISLSIGDIRLAEVKRKLTDQKHIAEFKGEGT
LVVDGQVSIRKINDGETIIDGSPSELYDIVKKAVVEMLAKI
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgacttatacgttccgctgttgtgatgatggatctggttatactgttggtacaattgtc
aggtttgacaatgttactatccttatagatccatcttggaatggaaaaaatgtttcatac
gctgatagtattaaatattggtctacaataattcctgaagttgatataattttattatct
cagccttctttggaatgcttaggtgcttattccatgttgtattataattttgtttctcat
ttcgtgtcaagaattgatgtttacgcaactctacctgtttcaaatttaggtcgtatttca
gtaattgaacaatatgcatgtgctggtattataggaccttatgagactaatgagatggat
ttagaagatattgaaaaatcatttgataatataaagactgtaaaatattcacaattggta
gatttgagatcaaaattcgatgggttgactttagtagcatataattcaggtgtgaatgct
ggtggtagtatttggtgtttattaacttattctgagaagttagtttatgctcctcattgg
aaccatacaaaggatactattctaaatggtgctgcacttttggataacaccggtaaacca
ctttctacgttaatgaaacctacagcgattataacatctctaggaagattcggctcagca
ctctcttttagaaagagatctaagaatttcaatgattcattgaaaaggggtttgagtaat
aatggttccattatgatcccggttgatatcacaggtaaatttttagatttattcgttcaa
gtccataattttctatatgagaactcgaaatcaggatcttataaccaaacacatgtacta
ttaatagcatatttcagaggaaaagtattgacatatgccagatcaatgttagaatggctt
tcttcatcactgatgaaaacttgggaatcaagagataacgcctctccgtttgatatagga
tcaaaatttaaagtcatcgatccttctgaaatatcaaactttccgggctcaaaggtttgc
tttgtatcccaagttgatatactactgaatgaggtcttaacaaaattatgtagcatgaat
aagaccactgttctaatgacatcaactaataccaacaatacacagattttagaaactatg
tatgaaaagtgggaaaaggccaaaacattacaaaaattacaagatggtagtactatatca
tttacagataccgtgttgttaaaaattgcatcatataaacccttagttaacgagcagtta
gaagaatataatgccagattgaaagaaagaagggataaatgtaaagaaacagtggaaatc
ttgaaaaaagaagcaaaattgggaactagaattggagatatgtatagaagtgaaggtgtt
ggattgatacactctctaaatgacgaagaagatgaggacgaagatgaagaagaagaaaat
attttaaattcaacaagttcacaaacaaaatcatttacggtaccagttgatataaagatc
aataggtctgcaacttcaaaacataagatgtttcctttccaaccgggtagaacaaaaatt
gatgattatggttctgtagttgatttcaacatgttcatcccagaagagttaaacactgaa
attgatacgaacaaaaggccatcttcaagaacaaatgaaatggatgatgatccatacgat
cttggcgatgctcaaaagataacaaaaagatcaagaagaggtgacagatcaaaatcacag
aatgaaaatgcagtttcaatagataatatccaatatctagaagctgataacaatccaaca
atacgaaccatatcagagaatagatctcatataaattgtacatttacatttatgaatctc
gatagtttggtagataccagatcagcaacggttatctggccgtcctttaaaccaagaaaa
attctattgcttgctgagaaagttcctcaaaacacacacataatttcaaccttacaaaag
aaggatatagaaatagtggagatgccatcgaacgttgaacagcaatttacaaccaccatc
aaagctcttgatatatctattgatcctgaactagaccaaatgttaagatggcaaaaaatt
ggttatggtcatactgtagcccatgtaataggtcgtctagtgaaggagaaagtacaaaat
tctaagttacaagacgatgacaaggagccattaaggaccaaaatggtattgaaaccaatg
gaaaacagaacgaaggttcatacaggaatttccctatctatcggtgatattagactagca
gaagtgaaaaggaaacttacagatcaaaagcatatagctgaattcaaaggtgaaggtaca
ttggtggttgacggccaggtttcgatacggaagatcaacgatggtgaaacaattattgac
ggttctccttctgaactttacgacatcgtcaaaaaggcagtggtagaaatgttagctaaa
atttaa
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