KEGG   Vanderwaltozyma polyspora: Kpol_1041p33
Entry
Kpol_1041p33      CDS       T01049                                 
Name
(RefSeq) hypothetical protein
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
vpo  Vanderwaltozyma polyspora
Pathway
vpo03013  Nucleocytoplasmic transport
vpo03015  mRNA surveillance pathway
vpo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vpo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Kpol_1041p33
  09122 Translation
   03013 Nucleocytoplasmic transport
    Kpol_1041p33
   03015 mRNA surveillance pathway
    Kpol_1041p33
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vpo03019]
    Kpol_1041p33
   03041 Spliceosome [BR:vpo03041]
    Kpol_1041p33
Enzymes [BR:vpo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Kpol_1041p33
Messenger RNA biogenesis [BR:vpo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     Kpol_1041p33
Spliceosome [BR:vpo03041]
 Complex C
  Other components
   EJC/TREX
    Kpol_1041p33
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    Kpol_1041p33
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 P-loop_SecA
Other DBs
NCBI-GeneID: 5545160
NCBI-ProteinID: XP_001644833
UniProt: A7TLA0
LinkDB
AA seq 441 aa
MSHEGEEDLLEYSDNEQDIQVDASKAAEPSELDATTAEDASNGDAEKKGSYVGIHSTGFK
DFLLKPELARAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLD
PVPGEVSVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPINKDAELLKNKETAP
HIVVATPGRLKALVRDKLIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRDKQVMM
FSATLSEEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYTKLQENEKNRKLAQLLDDLE
FNQVIIFVKSTKRANELTKLLNESNFPAITVHGHMKQAERIARYKAFKEFEKRICVSTDV
FGRGIDIERINLAINYDLTTEADQYLHRVGRAGRFGTKGLAISFVSSPEDEEVLGKIQER
FDVKIAEFPEEGIDPSTYLNN
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgtcacacgaaggtgaagaagatttattagaatattctgataatgaacaagatattcaa
gttgatgcttccaaagcagctgaaccatctgaattagatgctactactgctgaagatgcc
tccaatggtgatgccgaaaagaagggttcttatgttggtattcattcaactggtttcaaa
gatttcttgttgaaacctgaattggcaagagccattatcgattgtggtttcgaacatcct
tctgaagttcaacaacatactatcccacaatctatccatggtactgatgttttatgtcaa
gccaaatctggtttgggtaagaccgccgtcttcgtattatctactttgcaacaattggac
cccgttccaggtgaagtttctgttgttgttatttgtaatgcaagagaattggcttatcag
attcgtaatgaatatttaagattctcaaaatatatgccagatgtcaagaccgctgtcttc
tatggtggtactccaattaataaggatgccgaattgttgaagaacaaggaaactgctcca
cacattgttgtcgctaccccaggtcgtttaaaggctttggttagagataaattaattgac
ttatctcatgtcaagaacttcgtcattgacgaatgtgataaagtattagaagaattagat
atgagaagagatgtccaagatattttcagagctaccccaagagacaagcaagtgatgatg
ttttctgctacattatctgaagaaatcagaccaatctgtagacgtttcttacaaaatcca
ttggaaattttcgttgacgatgaagctaagttgaccttacatggtttacaacaatactac
actaaactacaagaaaatgaaaagaaccgtaaattagcccaattattagatgacttagaa
tttaaccaagttatcattttcgtcaaatccaccaagagagcaaatgaattaaccaagttg
ttgaatgaatctaatttcccagctattactgttcacggtcatatgaaacaagctgaacgt
attgctcgttacaaggctttcaaagaatttgaaaagcgtatctgtgtatctactgatgtc
tttggtagaggtattgatattgaacgtatcaacttagccatcaattacgatttaaccacc
gaagctgatcaatatttacatcgtgttggtagagctggtagatttggtaccaaaggtttg
gccatttcttttgtctcttctccagaagatgaagaagtcttgggtaaaatccaagaacgt
tttgacgttaaaattgccgaattcccagaagaaggtattgatccatctacttacttgaac
aactga

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