KEGG   Vanderwaltozyma polyspora: Kpol_1048p2
Entry
Kpol_1048p2       CDS       T01049                                 
Name
(RefSeq) hypothetical protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
vpo  Vanderwaltozyma polyspora
Pathway
vpo03018  RNA degradation
vpo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vpo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Kpol_1048p2
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Kpol_1048p2
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vpo03019]
    Kpol_1048p2
   03041 Spliceosome [BR:vpo03041]
    Kpol_1048p2
Messenger RNA biogenesis [BR:vpo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Kpol_1048p2
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     Kpol_1048p2
Spliceosome [BR:vpo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    Kpol_1048p2
SSDB
Motif
Pfam: LSM Hfq_1
Other DBs
NCBI-GeneID: 5546873
NCBI-ProteinID: XP_001646430
UniProt: A7TGG5
LinkDB
AA seq 126 aa
MSEMEQERRGTSHQQHGGQHHHHSQHKKKFEGPKREAIVDLAKYKDTKIRVKLMGGRLVT
GVLKGYDPLMTLVLDETVEYLRDLEDSSIILKDQTRDLGLTVIRGTVLLSLSPVDGSETI
YLQMED
NT seq 381 nt   +upstreamnt  +downstreamnt
atgtcagaaatggaacaagagagacgtggaacttctcatcagcagcatggtggtcaacat
caccatcattcgcagcataagaagaagtttgaaggtcctaagagagaagctattgtggat
ttggccaaatataaagataccaaaatacgtgttaagttgatgggtgggagattagttact
ggtgttttaaaaggttacgatcctttgatgactttagtcttagatgagaccgttgaatat
ttgagagatttggaagattcttctattattttgaaagatcaaaccagagatctaggtttg
acagttataaggggtactgttttgttatcattgagtccagtagatggctctgaaactata
tatttacaaatggaagattag

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