Vanderwaltozyma polyspora: Kpol_1048p5
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Entry
Kpol_1048p5 CDS
T01049
Name
(RefSeq) hypothetical protein
KO
K12879
THO complex subunit 2
Organism
vpo
Vanderwaltozyma polyspora
Pathway
vpo03013
Nucleocytoplasmic transport
vpo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vpo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Kpol_1048p5
09122 Translation
03013 Nucleocytoplasmic transport
Kpol_1048p5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpo03019
]
Kpol_1048p5
03041 Spliceosome [BR:
vpo03041
]
Kpol_1048p5
Messenger RNA biogenesis [BR:
vpo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
Kpol_1048p5
Spliceosome [BR:
vpo03041
]
Complex C
Other components
EJC/TREX
Kpol_1048p5
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
Kpol_1048p5
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
NADH-UOR_E
Motif
Other DBs
NCBI-GeneID:
5546874
NCBI-ProteinID:
XP_001646433
UniProt:
A7TGG8
LinkDB
All DBs
AA seq
1635 aa
AA seq
DB search
MLFAKLNQLVRDIKPLDVERTFFTTEVIDNWETKHEELCNQYLGFDGVEEKSRWLKSIFV
ECFRLYYQENEDHFLTAEQISKFVTRLVEVSKDSGRIGKMFIASSSTSNDEEVSKLISLM
KLISSIEEEMYKYSWVSGKIMVKDQKSILKHRLKKYKYEVKKHNLFFECSVGYSQLVSLL
LMAYNDNNNLQKITFYIDEVYHISGKYSLDSMRVLDTILRVSSNFITDGYTFLVEFLKAS
DFWPKNNSLADNSNYVGLKKGGNLIASNIIQFYLNSDLQDEEYLKYVDMCCILIINGFVN
FSSIWENLKPSDSSLEEYFTEFDKELEEESLKGSSNPLALAAALTADDDDDDDSNSFNKD
SNNKMKASQVKPNAEDNEVDDSTNQIDNKGVDEEENTKSIKKKLFLLQRLLAHGCTVPVF
YILERYPKFMFIEDTTAKLVTRVFSYKLDDFYHEFCIPHLHDISDPLDIPCVENGNLSVK
KQLMIERETHNPFVGISLQTKFKFYYSDWSKEFTKIDSIDTLISKSHKYFHYLGPYLAKE
PQLISKICRIGIKSIQNNSKVEETNSVDIWVDYFRKFILPCIPLLEVNPTITTEIYELMK
LFSFEKRYFMFNEMISKLSQDNLLIKLGFTKAEKEARSTLKSLSTDNIEFEAINFANLIS
TNPIATLLPTVKQIENYDKVSELVIYSAKYFNNFAYDVLQYILLLRLTDGRSAVQADGVN
QTMWVSRLSSFIAGLAKSCSKMDISNIICYIKKTLHQGNVIAISILKELISTISGIKDLN
EINIKQLLALNSGEQLQIMARRLIYDLRDDNKEQASKLVELLVQDNGVSEVLLLLYNMIV
ESNIVGFHYKILSTRSDELNSLLFSFIELVKFCMDKDSYIKHVISFQKLVNNYNVSIPWA
FHIWRDYIGVVGGINVHLEGDKMEGDSLELSYKEVNFKGENISDISQDFFVHFWIFSLYD
IQYDENLYDENKNSLETEIGRLASARKKNELLKQVKEITDDYLLHEKRVRNTLSVLEEKS
SHWIEQSTKSDQILFFQHCIIPRALFSPVDALYSAYFLCSAFKDETLDHICHLLVDSKVL
STLLFTCTSLEACNFGIFFSKLLSYLEESRLLLETDDEKNRKYFMLFESITNQILDTLLE
KNYMSIRNGIEFMKHISKVFPIVDTHIRVVILTLENNLVGEEREDIKLPTNALIGHLKAR
LKNALKQSEFCELNEDEIREQHQFELELAEIEKHRCMIEIDQKKEKLRKQIEESRKKRAA
DTLSKDNKEATPTSSQRKIVDIPTGPSSSNIKGIPTAPAALKSNTSVLIGNPNQSNQSSV
NRDITSSPAASTVSSSTLKSSKLYPLLRENINAVSSSSNWTMPQVLKLMKEVIYNLSVNN
LNRVMTLIDEEREVAKLKKFGEQEQPLADFRNNIYRVLQGYFKQIADDPLNEDFIQSLQD
LKTIMQRVSQKNIIKSRESKSDQSSSIQPSSRYNSNPKSEKQLEVSQNQRNSTDNKFGST
SKYGNRYYTQGSSERSQVNRRINSNGKYSDNNYPKQDKVGYATKRGRSDYSDSRSQSSYD
NSVRKPNDHGNDDRSNKRLRRDDNRNDGSRQDYRQSRENQLKDVGRSRFGDQKKEKSSWL
PQGPKNSGGQSRYNK
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttgctaagttgaaccagttggttagggacattaaacccttggacgttgaaaga
acttttttcactacagaggttattgacaattgggaaactaaacatgaagagctgtgcaat
cagtatcttggttttgatggtgttgaagagaagtctcgttggcttaagtctatcttcgta
gaatgttttagactttattaccaagaaaatgaagaccattttttaactgctgaacagata
tccaaatttgttactagattagttgaagtctcgaaagattctggtaggataggtaagatg
tttattgcttcttcttctacttcaaacgatgaagaggtttcaaaattaatcagtttgatg
aaattgatatcgtctattgaagaagaaatgtataaatatagttgggttagtgggaaaata
atggtaaaagaccaaaagtctatcctgaaacatagactaaagaaatataaatatgaagtt
aaaaaacataatttgttctttgaatgcagtgttggttattctcaattggtctctttactt
ttaatggcatataacgataataataacctacaaaaaatcacattttatattgatgaagtt
tatcatatttcaggtaaatactctttggattctatgcgtgttttagataccatattgaga
gtttcaagtaatttcataactgatggttacacttttttagttgaattcctaaaggcatcg
gatttctggccaaagaataatagtctggcggataattcaaattacgttggtttaaagaaa
ggtggtaacttaattgcttcgaatataatccaattttatttgaattctgatttacaagat
gaagaatatttgaaatatgtagatatgtgttgtattcttatcattaacggattcgtcaat
ttctcatctatatgggaaaatttaaaaccttctgattcctcattagaagaatattttaca
gaattcgataaggagttggaggaagaatctttgaaaggaagttctaatccattggccttg
gcagctgctttgaccgcagacgacgacgatgatgatgattcaaacagctttaacaaagat
tctaataataaaatgaaggccagtcaagttaaaccaaatgctgaggacaatgaagtagat
gactcgactaatcaaatcgataataaaggtgtagatgaagaagaaaatacaaagtcaatc
aaaaaaaagctattcctattacaaagacttcttgcccatggatgcactgtgcctgttttc
tacatcttagagagatatccaaaattcatgtttattgaagatacaacggcaaaactagta
acaagggtattttcttacaagctagatgatttttatcatgaattttgtattccacactta
catgatatttctgatcctctagatattccatgtgttgaaaatggtaatttatcagtgaaa
aaacaattaatgattgaaagagaaacacataatccttttgttggtatatctttgcaaacc
aaatttaaattttattattctgactggagtaaagagtttacaaaaattgattcaattgat
acattgatatccaaatcccacaagtattttcattatttgggaccatatctagcaaaagaa
cctcagctaatttcaaaaatttgtagaattggtattaagtctattcaaaataattctaaa
gttgaagagaccaattcggtagatatttgggtggattattttagaaaattcatcttaccg
tgcattcctctgctagaagttaatccaacgataacaacagaaatatatgaactcatgaaa
ttattttcattcgagaaaagatattttatgttcaacgaaatgatctcgaaattatcacaa
gataacctacttataaaattaggttttacaaaagcggaaaaggaagcaagaagtacatta
aaatcattaagcacagataatattgaatttgaagctattaactttgcaaacttgatttct
actaatccgattgcaacacttctacctacagttaaacaaattgaaaattacgataaagta
tctgaattggttatatattctgccaaatatttcaataattttgcctacgatgttctacaa
tatatcttattgttgcgtttgactgacgggagaagtgcagttcaggctgatggtgttaac
caaaccatgtgggtttcacgtctttcttcatttattgcaggtttagcaaagagttgctca
aaaatggatatttcaaatattatctgttacattaagaaaaccttacatcaaggaaatgta
attgcgatttctattttaaaagagttgatttctactatcagtggcattaaggacttgaac
gaaattaatattaagcaattgttagcgttgaattctggtgaacaactgcagataatggca
agacgtttgatttatgaccttcgagatgataacaaagaacaagcctctaagttggtggag
cttctagtacaagataatggtgtatctgaagttttgcttttactttacaacatgattgta
gaatcaaatatagttggcttccattataaaattctgtctacaaggtcagatgaattgaac
agtttacttttctccttcatagaactagtgaaattctgcatggataaagatagctatatc
aaacatgtgatatcctttcaaaagttggtaaataattataatgtatctatcccatgggcc
ttccacatttggcgagattacattggtgtggttggtggcattaatgttcatttggaaggt
gataaaatggaaggtgattccttagaattgtcatataaagaagttaattttaaaggtgaa
aatatttctgatatcagccaagatttcttcgtacatttttggatcttttcattatatgat
atccaatatgatgaaaatctttatgatgaaaataaaaacagcttggaaacagaaattgga
aggttggcttctgcaaggaaaaagaatgagttgttgaaacaagtcaaagaaattacagat
gattacttattgcatgaaaagcgagttcgtaacacattgagtgtattagaagaaaaatcc
agtcattggattgaacaatccactaaaagtgatcaaattttgttctttcaacattgtata
atcccaagagccttgttctctccagtcgatgcactgtactcagcttactttctatgttct
gcatttaaagatgaaaccttggatcatatttgtcacctccttgttgattccaaagtttta
agtactcttctattcacatgtactagtttggaagcatgtaacttcggtatttttttctca
aaactgttatcatatttggaagaatcgagactacttttggaaacagatgatgaaaagaat
agaaaatattttatgctatttgagtcgataactaaccaaatattggataccttgttagaa
aagaactatatgtccattagaaatggaattgagtttatgaaacatatttctaaagtattc
ccaattgttgatactcatataagggttgtgatattaactttagaaaataatttggttggg
gaagaaagagaggatattaaattacctaccaatgctttaattggacacttgaaggctaga
ttaaaaaatgcactgaaacaatctgaattctgtgaattaaatgaagacgaaatcagagag
caacatcagtttgaacttgaactagctgaaattgagaagcatagatgtatgatagaaatc
gatcagaagaaagaaaagttgagaaagcaaattgaagagagtaggaaaaaacgtgctgct
gacactttatccaaggataacaaggaagctacacctactagttcacaacgtaaaattgtc
gatataccaactggaccatcttcttcgaatattaaaggaataccgactgcacctgctgcc
ttaaaatcgaatacttctgttctgattggaaacccaaatcaaagtaaccaatcttctgtt
aatcgagatataacttcatccccagcagcctcgactgtttcttcttcaacgctaaaatca
tcaaaattatatccattattaagagagaatataaatgctgtttcatcttcctcaaattgg
acaatgcctcaggttttaaaattgatgaaggaagttatctataatttaagtgttaataat
ttaaacagggttatgacattaattgatgaagaacgggaagtagcaaagctcaaaaagttt
ggtgagcaagaacaaccacttgcagattttaggaacaacatttacagagttttacaagga
tattttaagcagatagcagatgatcctctaaatgaagattttattcaaagcctgcaagac
ctgaaaaccatcatgcaaagagtgagtcaaaaaaacattattaaatcaagagaatctaag
tctgaccaatcaagtagtattcaaccttcaagtagatacaattctaatccaaaaagtgaa
aagcagctggaagtgtctcaaaatcaacgcaatagcactgataataaattcggctcaacc
tcgaaatatggtaatagatattatacccagggaagttcagaaaggtcacaagttaataga
agaattaattctaatggtaagtattctgataataactaccctaaacaagataaggttgga
tatgctactaaacgtggcaggtctgattattctgattctagatcacagtctagttatgat
aatagcgttaggaagccaaatgatcatggaaatgatgataggtctaacaaacgtttaaga
agagatgataatcgtaatgatggaagtagacaagactatagacaaagtagagaaaaccaa
ttaaaggatgtgggccgttcaaggtttggtgatcaaaagaaggagaaatcatcgtggttg
ccacaaggtccaaagaactctggtggacaaagcaggtataataaatga
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integrated database retrieval system