Vanderwaltozyma polyspora: Kpol_1055p74 Help Entry Kpol_1055p74      CDS       T01049                                  Name (RefSeq) hypothetical protein   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism vpo  Vanderwaltozyma polyspora Pathway vpo03018   RNA degradation Brite KEGG Orthology (KO) [BR:vpo00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     Kpol_1055p74  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vpo03019]     Kpol_1055p74 Enzymes [BR:vpo01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      Kpol_1055p74 Messenger RNA biogenesis [BR:vpo03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      Kpol_1055p74   mRNA degradation factors    3'-5' decay     Ski complex      Kpol_1055p74 SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD Ski2_beta-barrel MTR4-like_stalk Helicase_C ResIII DEXQc_Suv3 MTR4_beta-barrel DUF3053 Pox_RNA_Pol_19 Motif Other DBs NCBI-GeneID:  5547027 NCBI-ProteinID:  XP_001646575 UniProt:  A7TGE7 LinkDB All DBs AA seq 1274 aa AA seqDB search MSSLDTIDALYKSLREVTNEDVELFEDKITKLDFDKDSKEPDLENIRNIYLKPTNNLSWG LLDLVQNVPSMNFLDEPNGNDTNQSAYDYKDLFQLPEPIKRTAYYFKRRGIEGHIDNYKE EVNLKEIANANASNSLSLTRTVNAHGNFISGSSSQLPFAPGGVVMGPEGTRKKNTSAMST ATKLLHKDDQGLFDIPTGFERGILPQLHVSTTNDQVDTIHEIDSIDNEIANKEEIEQLYD NEDNLVKELTQTVLANQPTTADLNEIDDLLPIGIEFGRTVKNQQNLLERKEWAHVVDLNH KIENFSEMVPNPARTWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMSKR NMTKTIYTSPIKALSNQKFRDFKETFDDIEIGLITGDVQINPEANCLIMTTEILRSMLYR GADLIRDVEFVIFDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGR TKQKNIYVISTPKRPVPLEINIWAKNTLIPVINSKREFLEANFKKHKQLIEGVPSSSKPD DKKTNNSRGGSIRGGSRRGGSTRGGSSTRGNALSGSRGAGAVGSNKSKFFRRGGPNKKTW PDIINFLKGRELLPVVIFVFSKKRCEDYADYLESLNFCNNREKSQIHMFIEKSITRLKKE DRELPQILKIRSLLERGIAVHHGGLLPIVKELIEILFSKGLIRVLFATETFAMGLNLPTR TVIFSEIQKHDGVGLRDLNPGEFTQMAGRAGRRGLDDTGTVIVMAYNDPLQSLSFKEVTL GVPTKLESQFKLTYNMILNLLRIEALKVEEMIKYSFSENTKQTLLPEHEKKIKELQESLS AIKDIDCAVCGDHLDSFLNDSIRYSEVTANMMEELTKTGAVFYVLKAGRLILFRDIDGSA KLGFIYSNNVKAATLRVISFTSPNILPNGQPNHLPYLSSIAQYCNRYFNKFKSIPFTIEE ISVSAIEIVSPLVLKVPFTQIINGEPEAMAKLHEEIKVVLRIAPKLKESKTEKRGNLKVH QSLVERANIKERLENSEVLKCDDLYSHFEPKYKKFMIEKEIKGLYHLMSDQNLNLLPDYE KRLSVLKATGFIDQNHNVMLKGRVACEINSGYELVITELILDNFLGDFEPEEIVALLSVF IYEGRTKDEEPPIGTPRLAKGKKKIEEIYKKMLNVYEAEQIPLTREEAEFLDMKRFALMN VVYEWARGLSFKEIMEISVEQEGTVVRVITRLDEICRQVKTAAIIIGNSNLHQKMTQAQE LIKRDIVFAASLYL NT seq 3825 nt NT seq  +upstreamnt  +downstreamnt atgagttctcttgatacaattgatgctctctacaagagtttaagagaagttactaacgaa gatgtcgaattattcgaagataaaataactaaattagatttcgataaggattcaaaagag ccagacttagagaatattagaaatatatatctaaaacctacaaataacttatcttggggt ttattagatttagttcaaaatgttccatcaatgaatttcttggatgagcctaatggtaac gatacaaaccaatccgcttatgattataaagatcttttccaattaccagagcctatcaaa agaacagcatattattttaaaagacgtggtattgaaggtcatattgacaattataaggaa gaagttaacttaaaggaaattgcaaacgctaatgcttcaaattctttgtcattaacaaga acagttaatgcacatggtaatttcatctcaggttcaagttcacaacttccatttgctcct ggtggtgtagttatgggccctgaaggcacaaggaagaaaaatacttcagcaatgtcgact gctactaaacttctgcataaggatgaccaaggtttatttgatatcccaacaggatttgag cgaggaatattgccacagttacatgtgtctactaccaatgatcaagttgatactattcat gagattgattctattgataatgaaattgcaaacaaagaagaaatagaacagttatatgat aatgaagataacttagttaaagaacttactcaaactgttttggctaatcaacctacaacc gcagatttaaatgaaatcgacgatctattgccaataggaatcgaatttggaagaactgtc aaaaaccaacaaaatttgctcgaaagaaaagaatgggctcatgtagtagatttgaatcac aagattgagaattttagtgaaatggttccaaatccagcaagaacatggccgttcgagtta gatacctttcaaaaagaagctgtataccatttagagcaaggtgattccgtatttgtagca gcacacacatctgcaggtaaaaccgtcgttgctgaatacgctattgcgatgtcaaagcgt aacatgactaagactatatatacctcaccaatcaaagcattatcgaatcagaaatttaga gactttaaagaaacttttgatgacattgaaatagggttaattactggtgatgttcagatt aatcccgaagctaattgtttaattatgactactgaaattttaagatcaatgctttatcgt ggtgctgaccttatcagagatgtcgagtttgttatctttgatgaagtccattatgttaat gatcaagatcgtggtgttgtatgggaggaagttataattatgttaccacagcatgtaaag tttattctgttatctgctactgtccctaacacttatgaatttgcaaattggataggtaga acgaaacaaaaaaatatatatgttatttctacgcctaaaagacccgtgcccttagaaatc aatatttgggccaagaatactttaatcccagtaattaattccaagagagaatttttagag gcaaattttaaaaagcataaacaattgatagaaggggttccatcttcttccaagccagat gataagaagaccaataacagtagaggtggttctataagaggaggatcaagaaggggtgga tctacaagaggtggttcttcaaccagagggaacgcactcagtggatctcgtggtgctggt gctgttggttctaataaaagtaaattctttagaagaggtggtcctaataagaagacttgg cctgatatcatcaatttcttgaagggaagggaacttttaccagttgttatctttgttttt agtaagaagcgttgtgaagattatgctgattatctagagagtctgaatttctgcaataac agagaaaaatctcaaattcatatgttcattgaaaaatcaataacaagattaaagaaggaa gatagagaattacctcaaattttgaagattagatcattattggaaagaggtattgcagtt caccacggtggtctattgccaattgtgaaagaattgatagaaatattgttctctaaggga ttgatacgtgttttatttgctaccgaaacatttgcaatggggttgaacttaccaacaaga actgttatctttagtgagattcagaaacatgatggtgttggtctaagagatttaaatcct ggtgaatttacacaaatggcgggtagagcaggccgtagagggttagatgatactggtacc gtaattgtcatggcatataatgatccattacaatcgttatcatttaaggaagtaactctt ggtgttccaactaaattagaatctcaatttaaattgacttataacatgattttgaatttg ctaagaattgaagcgttaaaagttgaagaaatgataaaatattcttttagtgaaaacacc aagcaaaccttgctacctgaacatgaaaagaagattaaagaattacaggaatctttatct gctataaaagatattgattgtgcagtttgtggtgaccatttagatagtttcttaaatgat tctattagatactctgaagtaaccgctaatatgatggaggaattgacaaagacaggtgct gttttctatgtgttaaaggcaggaagactgattttatttagagatatagacggttctgct aaattgggatttatttatagtaacaatgtgaaggcagcaactctaagggttatatctttt acatcaccaaacattttacctaatgggcaacctaatcatttgccatatttatcttccatt gctcagtattgtaacaggtattttaataagtttaagagtataccttttactattgaggag atttctgtgagcgctattgaaattgtttccccattagttttgaaagttccgttcacacag atcataaatggagaaccggaagcaatggccaaattacatgaagagattaaagttgtacta agaattgcaccaaagttgaaagaaagtaagacagaaaagagaggtaacttaaaggtgcat caaagtttagtagaaagggcaaacattaaagaaagattggagaatagtgaggttttgaaa tgtgatgatttatattcacattttgaaccaaagtataagaaattcatgattgagaaagaa attaaaggtttatatcatttgatgtcagatcaaaatttgaatttattaccagattatgag aagagattatccgttttaaaagccacagggttcattgatcagaatcataatgttatgtta aagggacgtgttgcttgcgagatcaattcagggtatgaactggtaatcactgaattaatc ttggacaatttcttgggtgattttgaacctgaagagattgtagccttattaagtgttttc atttatgaaggtagaactaaagacgaagaaccacctattggaacaccaaggttagcaaaa ggtaagaagaagattgaagagatttataagaagatgttgaatgtttatgaagcagaacaa attcctttaaccagggaagaagctgaatttttagatatgaaaaggtttgcattgatgaat gttgtatatgaatgggctcgtggattatcatttaaagaaattatggagatcagtgttgaa caagaaggtacagttgtcagagttatcactagattagacgaaatttgtagacaagtgaag acagcggccattattattggtaattctaatttacaccaaaagatgacacaagcccaagag ttgattaaaagagatattgtatttgcagcaagtttgtatttgtaa

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