Vanderwaltozyma polyspora: Kpol_1060p11
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Entry
Kpol_1060p11 CDS
T01049
Name
(RefSeq) hypothetical protein
KO
K12814
pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 [EC:
5.6.2.6
]
Organism
vpo
Vanderwaltozyma polyspora
Pathway
vpo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vpo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Kpol_1060p11
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vpo03041
]
Kpol_1060p11
Enzymes [BR:
vpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Kpol_1060p11
Spliceosome [BR:
vpo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
Kpol_1060p11
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
DEAD
AAA_22
HA2_C
AAA_19
AAA_30
nSTAND3
T2SSE
Flavi_DEAD
ABC_tran
PhoH
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
5545573
NCBI-ProteinID:
XP_001645215
UniProt:
A7TK11
LinkDB
All DBs
AA seq
899 aa
AA seq
DB search
MDTLRGKGKRRVRETYEKVVDETPVVELEDKVDEVVGVEKSSVEKPSVEGDAKSGIEEDL
NDIRLLARQRYLNAREEQKYESLKRELVLLEEDVEKYGWENLSKREQDEINLKKSIISII
EEKKNINNNKSFTILDNLQSNDEGGSSSLEYKKRLLNNRQGVYANAKLKKNLEWEEQQLQ
IALKKNDIDEIHVENSKDYEFVFDTEAMIDFTNDGDDLLKDEESEYENELLENINKEQER
LLDIQQGRKSLPVYQYRSQLLQAIKDHQVLIVVGETGSGKTTQLPQYLVEDGYTKNGTLQ
IAVTQPRRVAATSVAARVADEMGVVLGKEVGYSIRFEDKTTPNTTILKYMTDGMLLREFL
SDPELKNYSCIMIDEAHERTLATDILLGLLKDILLHRKDLKLIISSATMNASKFSKFFYD
CPIFNVPGRRFPVDIHYTVQPEANYLHAAITTIFQIHTTQPLPGDILVFLTGQEEIESTK
ERIEEIAHKLGSRVPEMLVTPIYANLPQEQQQKIFEKTPEGCRKIVLATNIAETSLTING
IKYVVDPGFVKENSYVPTTGMTQLLTVACSKASVDQRAGRAGRVGPGKCFRLFTKWSYYH
ELEATPKPEIIRTNISSIVLLLLSLGITDLINFPLLDKPSIPSLSKSLEILYVLGALNSK
GSITRLGRLMCQFPCEPEFAKVIYTAAYNETANGVLEQCITIVSMLHETTSLFVGNSRDS
LKSIVGETTSDHLLYLKIYDEWKNSNYSKMWCKDHKVQFKTLSRVRDIRNQLWKFCDKMG
LVSMNEKALKELVDPTQSMEIKIIKCFISGFPMNIAKLGTSGYKTVSTKNSSGLEVTIHP
SSVVFQQQKENAKKPSKYILYQQLMLTTKEFARVCMPIIKESWLSEMVPQIFKPNNEFN
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggatacactgagaggtaaaggtaaaagaagagttagggaaacctatgagaaagtagtt
gatgaaacaccagtggttgaacttgaggataaagttgatgaagttgttggagttgaaaag
tcatctgttgaaaaaccatctgttgaaggagacgctaagagtgggatagaggaagactta
aatgatattaggttattggcaagacaacggtatttaaatgccagagaggaacaaaaatat
gaaagtttgaaaagagaattggtattgttggaagaagacgttgagaaatatggatgggag
aatttatccaaaagagagcaagatgagattaatttgaaaaaatcaatcataagtattata
gaggagaaaaaaaatataaataataataaatcatttactatactagataatctccaatcc
aatgatgaaggtggatcttcaagtttagaatataagaaaaggttgctaaataatagacag
ggagtatatgctaatgccaaactaaagaaaaatttggaatgggaagaacaacaattacaa
atagcattaaagaaaaatgatattgatgaaattcatgttgaaaattctaaagattatgaa
tttgtatttgatacagaggctatgattgactttactaatgacggagatgaccttttaaaa
gatgaggaatcggaatatgaaaatgaacttcttgaaaatataaataaagaacaagaaagg
ttgttagatattcaacaaggtagaaaatcactacctgtatatcagtacagatcccaatta
ttgcaggcaataaaggatcatcaagtgttgattgtcgtgggtgaaacaggttctggtaaa
actactcagttaccacaatatttggtagaagatggctataccaaaaatggtactttacaa
attgctgtcacccaaccaagaagagttgctgctacatcagtagcagcaagagtcgcagat
gaaatgggagtagttttgggaaaggaagttggttattccattcgttttgaagacaaaaca
accccaaatacaacaatcttgaaatatatgacagatggtatgcttctgagagaatttttg
tcagatccagaactgaaaaattattcctgtattatgattgacgaagctcatgaacgtact
ttggcaactgatatattattagggttattaaaggatattttattacatagaaaggatcta
aaattaattatttcatctgctacaatgaatgcttcaaagttttctaaatttttttatgat
tgtcccatcttcaatgttccaggtagaagattcccagtagatattcattatacagtacag
ccagaggcaaactacctccatgcagcgattacaactatatttcaaatacataccactcaa
ccactgcctggtgatatattggtattcctaactggtcaagaggaaatcgaatctacaaag
gaaagaatagaggaaatagcacataaattaggttcaagagttccagaaatgctagttact
cctatttacgctaatttaccacaagagcaacaacaaaagatatttgaaaagacaccagaa
ggttgtcgtaaaattgtacttgcgacaaatattgcagaaacttctcttactattaatggt
atcaaatatgtagttgacccaggttttgttaaagagaattcatatgttccaacaacgggg
atgacacagctattgacagtcgcttgttcaaaggcatctgttgatcagagggcaggtaga
gcaggacgtgttggccctggtaaatgttttagattatttactaaatggtcatattatcat
gaattggaagcaacaccaaagcctgaaattattagaaccaatatttctagtattgtatta
ctattgctatcattaggaatcactgatttaattaacttcccattattagataaaccaagt
atcccatcactttcaaaatcattggaaattctatatgttttgggagccttgaatagtaaa
ggctcgataactaggttaggtagactaatgtgtcaatttccttgtgaaccagaatttgcc
aaagtaatatatactgctgcatacaatgagacagcaaatggtgttttggaacaatgcatt
acaattgtatcaatgttacatgaaacgacgtccttgtttgtggggaactctagggattct
ttgaagagtattgtaggtgagacgactagtgatcatttactatatctgaaaatatatgat
gaatggaaaaattcaaactattcaaaaatgtggtgcaaagatcataaagtccaatttaaa
actctatcgagagttagagatatcaggaatcaattatggaagttctgtgataaaatgggt
ctagtttccatgaatgaaaaggcactaaaagaattagtggatcctacccagagtatggaa
ataaaaataatcaaatgttttatcagtgggttccctatgaacattgcaaagttaggtaca
tctgggtataagacagtctcaacaaagaatagcagtgggttagaggtcacaattcatcct
tcaagtgtcgtgtttcaacagcaaaaggaaaatgcaaagaagccatccaaatatattttg
taccagcagttgatgttaaccactaaggaatttgcaagagtttgtatgcctataatcaaa
gaatcatggctatcagaaatggtgccgcaaatattcaaaccaaataatgaatttaattaa
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