Vanderwaltozyma polyspora: Kpol_2002p50
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Entry
Kpol_2002p50 CDS
T01049
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
vpo
Vanderwaltozyma polyspora
Pathway
vpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Kpol_2002p50
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpo03019
]
Kpol_2002p50
Messenger RNA biogenesis [BR:
vpo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Kpol_2002p50
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
5547305
NCBI-ProteinID:
XP_001646837
UniProt:
A7TFG5
LinkDB
All DBs
AA seq
378 aa
AA seq
DB search
MIMSESLDAIDVIPLTFPPEVLSRISPELSLQRHLSLSLRPSLKGLQEFREVNIENNLIS
RYSNDNIPINDKDNTVIGSNILKCGRTIVMTSITAGIIESDVQDSLIDYGERELIEMCGE
RDTISKYSTVYPVVEVERGRGGAPPSDEEMNVSQKLHDCLLQSGILSKDNLKIKCGIRTI
DSEGTVSIKYPEDNDNDILEELNSKRHWSFILYAKIDVFSRTGPIFDMCWNSLIYALKNT
RLPKVFIDDRAMRLKKMVRSRGRSAAVKETYNMLCHETENEPLQLNDEMISYASNYGVVA
VEDEEEGDEKTKVLITDIDEESEESSVQSTMCIISGEGRLKSVEIIGGGSTVGIEEIKNA
IAISQIRSKDLKEVWDKK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgataatgagtgagagtttggatgctattgatgttatacctttaacgtttcctccagag
gttctctctagaatttctccagaattgtcattacaaaggcatttatcattatctttaaga
ccatcattgaagggcttacaagagtttagagaagtaaatatcgagaacaatttgatatct
aggtatagtaatgacaacataccaattaatgacaaggacaacactgtgattgggtccaat
atattgaaatgtggaaggactatagtaatgacttcgataaccgcgggaataattgaaagt
gatgttcaagattcactgattgattatggtgaaagagaattaattgaaatgtgtggtgag
cgtgataccatttcaaagtattcgactgtttatccagttgtagaagttgaaagaggccgt
ggtggagctcctccaagtgatgaagagatgaatgtatctcaaaaattacatgattgctta
ttacaatcaggtatactttcgaaggacaatttaaagattaaatgtgggatacgaacaatt
gattcagaaggaacagtttcaataaaataccctgaagataacgacaatgatattttggaa
gaattgaattcaaaaagacattggtcatttatattatatgcaaagattgatgtatttagt
agaacaggaccaatatttgatatgtgttggaattcgttgatatacgcattgaagaacact
agactgccaaaagttttcattgatgatagagctatgagattaaaaaaaatggtaaggtca
agaggccgtagtgctgctgttaaagagacttataacatgttatgccatgagacagagaat
gaaccattacaattgaatgatgaaatgatatcatatgcatcaaattatggtgtagttgct
gtggaagatgaagaagaaggagacgagaagacaaaagttttaattactgatatcgacgaa
gagagtgaagagagcagtgtccagagcacgatgtgcataatatctggtgaaggaaggttg
aagagtgttgaaattattggaggagggagtacagtaggaattgaagagatcaaaaatgcg
attgcaatttcacagattagaagtaaagatttgaaagaagtctgggacaagaaataa
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