Vanderwaltozyma polyspora: Kpol_337p1 Help Entry Kpol_337p1        CDS       T01049                                  Name (RefSeq) hypothetical protein   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism vpo  Vanderwaltozyma polyspora Pathway vpo03013   Nucleocytoplasmic transport vpo03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:vpo00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     Kpol_337p1    03015 mRNA surveillance pathway     Kpol_337p1  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vpo03019]     Kpol_337p1 Enzymes [BR:vpo01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      Kpol_337p1     5.6.2.5  RNA 5'-3' helicase      Kpol_337p1 Messenger RNA biogenesis [BR:vpo03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      Kpol_337p1    mRNA cycle factors     Common to processing body (P body) and stress granule      Kpol_337p1 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII UvrD-helicase SLFN-g3_helicase NPHP3_N DEAD Helicase_RecD PhoH AAA_16 AAA_22 nSTAND3 HSP20 Flavi_DEAD Transp_Tc5_C Motif Other DBs NCBI-GeneID:  5542595 NCBI-ProteinID:  XP_001642437 UniProt:  A7TT23 LinkDB All DBs AA seq 999 aa AA seqDB search MNGSTDNALFQPNRDTYVNHSGSDDTSFNDSQDDEFDYNSDDDLAGKEIDNNHLDKKAAI PNEHNLHAEIVAPVSEHSCAYCGIDSPTSVIKCNSCKKWFCNSKNGATSSHIVNHLVLSH HNVVSLHPDSDLGDTILECYNCGCKNVFLLGFVSAKSEAVVVLLCRVPCAQTKNVNWDTD QWQPIIDNRQFLPWVAEEPGDEEKLTARLITPSQISKLEAKWRSNKDATINDIDAPETQE EIPPILLRYQDAFEYQRSFGPLIKLEADYDKQLKESQALEHISVTWSLALNNRHLASFAL STFESNELKVAVGDEMILRYSGLQHPEWEGRGYIVRLPNSFKDEFTLELKPSKIPAPTQL GTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHEVHDIEFDVPIPTELSI PHFARLNASQASAVAHVLQKPLSLIQGPPGTGKTVTSATIVYHLSKSHKDRILVCAPSNV AVDHLASKLRDLGLKVVRLTAKSREDVESSVSDLALHNLVARSSKGELKKLLKLKEEVGE LSATDAKKFVRLVRKAESEILKKADVVCCTCVGAGDKRLDAKFRTVLIDESTQASEPECL IPIVKGAKQIILVGDHQQLGPVILERKAGDAGLKQSLFERLILLGHVPIRLEVQYRMNPF LSEFPSNMFYEGSLQNGVTIEQRTIPGSTFPWPIHEVPMMFWANYGREEISANGTSFLNR IEAMNCERIITRLFKDGVKPHQIGVITPYEGQRAYILQYMQMNGSLDKELYVNVEVASVD AFQGREKDYIILSCVRANEQQAIGFLSDPRRLNVGLTRAKYGLVILGNPRSLSRNVLWNH LLIHFREKGCLVEGPLNNLQLCTVQLTRSHPNKRNNQSRFQFSLNGEVGEIPNIQDFDTQ SLMSFGGHANANTMFNNNFAASSELSSFLNNEYWNTEKFKTQANKEQNESTMGNAFDERG YSNFDSSLARNLQANNGTTSKYYNVDLNDLNNGISSLGI NT seq 3000 nt NT seq  +upstreamnt  +downstreamnt atgaatggttctactgataatgcactattccagccaaacagagatacctatgtgaatcac tcaggttctgacgacactagttttaatgattcccaagatgatgaatttgattataattca gacgatgacttggctggtaaagaaattgataataatcatttagataaaaaggctgcaatt ccaaatgaacataatctacatgcagaaattgtagctccagtatctgaacactcgtgtgct tattgtggtatagattctcctacttctgttataaaatgtaatagttgtaaaaaatggttt tgtaattcaaaaaatggtgctactagttctcatatcgttaatcacctggttttatctcat cataatgttgtttctttacatccagattcggacctaggtgatacaattttagaatgttac aattgtggttgtaagaatgttttcttattgggatttgtctcggcaaagagtgaggcagtt gtggtattactatgtagagttccatgtgctcaaaccaaaaatgtaaattgggacactgac cagtggcaaccaattattgataacagacaatttttaccttgggttgctgaagagccaggt gatgaggaaaaattaactgcaagattgatcacaccaagtcaaatctcaaagttggaagct aaatggagatctaataaagatgctacaattaatgacattgatgctccagaaactcaagaa gaaatcccacctattttattaagataccaagatgcatttgaataccaaagatcatttggt cctctaatcaaactagaagctgattacgacaaacaactgaaagaatcacaagcattagag catatttcagttacttggtccttagctctgaataatagacatctagcctccttcgcatta tctacttttgaatctaatgaattgaaagtagctgttggtgatgaaatgattttaaggtat tcagggttacaacatccagaatgggaaggtagaggttatattgttagattaccaaacagt tttaaagatgaattcacattggagttaaaaccaagcaagattccagcgccaactcaattg ggaacggggttcactgcagaatttatctggaaaggtacgtcttatgacagaatgcaagat gcactaaagaaatttgccattgataagaaatccatctcaggttacctatattataaaata ttgggccatgaagttcatgatattgagtttgatgttccaatcccaactgaattatcaatt cctcattttgcaagattaaatgcttctcaagcaagtgcagttgcgcatgtattgcaaaaa ccattatctttgattcaaggtccgccaggtactggtaaaactgttacgtcagctacaatt gtatatcatttatcaaaatcccataaagacagaatcttagtctgtgctccatctaatgta gcagttgaccatttagctagcaaattacgcgatttgggtttaaaagttgttagattaacg gcaaaaagtagagaagatgttgaaagttctgtatctgatttggctttgcataatttagtt gctagatcatctaaaggagaattgaagaaacttttgaaattaaaagaagaagtcggtgaa ctatctgcaacagatgcaaagaaatttgttaggttagtgagaaaggctgaatctgaaatc ttaaagaaagcagatgtagtttgttgtacatgtgtgggtgctggtgacaagagactggat gctaagttcagaactgttttaattgatgaaagtacacaggcttcagaaccagagtgttta attcctattgtaaaaggtgctaagcaaattattttggttggtgaccatcagcaattaggt ccagttattttggagagaaaagcaggtgatgcaggattgaagcaatcacttttcgaaaga ttgattttattgggtcatgttccaatccgtttagaagttcaataccgtatgaacccattt ttaagtgaatttccaagtaatatgttctatgaaggtagtttacaaaatggtgttacaatt gagcagcgtaccatcccaggaagtacctttccttggccaattcatgaagttccaatgatg ttttgggccaattatggtagagaagaaatttctgctaatggtacatctttcttaaataga atagaagcaatgaattgtgaacgtattatcaccaggttattcaaagatggtgtcaaaccc caccaaattggtgttattaccccatatgaaggtcaaagggcttacatattacagtatatg caaatgaatggttccttagacaaggaattgtatgtcaatgttgaagttgcctctgttgat gctttccaaggccgtgaaaaggactacattatcttatcatgtgtacgtgctaatgaacaa caagctattggtttcttaagtgatcctcgtcgtttaaatgttggtttgacccgtgctaaa tatgggttagtaatattaggtaatcctagatcattgtctaggaatgttttatggaatcat ctattgatccactttagagaaaagggttgtttggtggaaggtccattgaataacttgcag ttatgtacagtacaattgacaagatctcatcctaacaaacgtaataaccaaagcagattt cagttcagcttgaatggtgaagttggtgaaattcctaatattcaagattttgatacacaa agtttaatgtcatttggtggtcatgctaatgcaaatacaatgtttaataataattttgca gctagtagtgaattgtcatccttcttgaataatgaatattggaatacagaaaagttcaag acacaggcaaacaaagagcaaaatgaatcaacaatgggaaacgcatttgatgaaagagga tactccaattttgattccagtttggcaagaaatttacaagccaataatggaacaacttca aaatactataatgtcgatctaaacgatttgaataatggtatctcttccttgggtatataa

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