Vanderwaltozyma polyspora: Kpol_538p37
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Entry
Kpol_538p37 CDS
T01049
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
vpo
Vanderwaltozyma polyspora
Pathway
vpo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vpo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Kpol_538p37
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpo03021
]
Kpol_538p37
03019 Messenger RNA biogenesis [BR:
vpo03019
]
Kpol_538p37
Transcription machinery [BR:
vpo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
Kpol_538p37
Messenger RNA biogenesis [BR:
vpo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
Kpol_538p37
U7-dependent histone pre-mRNA processing factors
Kpol_538p37
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
DUF7758
Motif
Other DBs
NCBI-GeneID:
5545483
NCBI-ProteinID:
XP_001645135
UniProt:
A7TKF0
LinkDB
All DBs
AA seq
810 aa
AA seq
DB search
MGSVEMDQLKKARDLAMTNSPGQMLPKVLETTMALYSSSNSSNELKLELARFFPQLFLDI
LNHSKIQSSEKPFIASSNLESLWIICKKNKDLSTYKHCIYTFAACYAMLFDLVAKTSNQN
LWNTMQEMKNFIISNWNTTYPLPSNTTEFGILLDKPVNIGSKLATAKFISEIVIVHTSSS
SSSSSSSSSSRNGVVTTSISSVPSNHPVIKNKAQIESEAKKLLDVLLNYLIEEPLMIAPV
FVGIINCLSFIMKQRPHAAIRISSALLKFNIDAKFQCDSMSPLNYRLSKRFVERSYKNFV
QFGLKAQLIKNSGQMSNIYTKLAKISQTLHGIGEETKTKGILNFDAKQIEKPMSEKDKLK
YIQNAASKMKKNLNDENQYIKSDDSKSSSSSISGSTSAGSQGSLNEQREDSTSKSPTPTI
DATTQNLMNLQKYTMSKNSSTNFFNTSPVAFDNSYGSIYSLMNSKHSEQDISSLSQDIMT
KLCSEALYNVDTTRLVSGLSIVASRYTELMTKSVPSDSDAESKKRKLDAEATENVAAKKV
KNEDEQFKKEPSDEVVDDEDEYLADEDNYQVSADQKSEPLIIKPAAMSHDDKIKHLKHIA
NRIMGIRDSDEATGISGALDQPINPLQKVKLMQWDNKETWVQILTRLATRGVSHDEEMSD
VIRQTLYDYFIDDINNRIAIVIEWLNEEWFYETLMNDKLEEKDENSNQQTYDKWSLKLLD
GLVPYLENQHRRIFIRLVSELPSLTQEHIDRVRPICLDPARSSLGFQSLKFLLMFRPPVK
SMIKNLLEQLKEEDSSTAEQCNAILTKFFQ
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggggtctgtagaaatggaccagttgaagaaggctagagatttggccatgactaatagt
cctggtcagatgttgcctaaagttctagagacgacaatggctttgtacagttctagtaat
tcttcaaacgaattgaagttggaattagctaggtttttcccacagttgtttttagatatt
ttaaatcatagtaagatccaatctagtgaaaagccttttattgcttcaagcaatttggag
tctctttggattatttgtaaaaaaaataaagatttgtccacttataaacattgtatatac
acttttgcagcttgttatgcaatgttatttgatcttgttgctaaaacttcaaatcaaaat
ttatggaatactatgcaagagatgaaaaattttataatttcaaattggaataccacttat
ccattaccttcaaatacaactgaatttgggatcttgctagataaaccagttaatatcggt
tcaaagttggctactgcaaaattcattagtgaaatagttatcgtgcatacttcttcctct
tcctcctcctcttcatcatctagtagttctagaaatggagttgtaaccactagcatatct
tcagtgccaagcaatcaccctgtaataaaaaataaagctcaaatcgaatcagaagctaaa
aagctgctagatgtacttttaaattatctgatagaagaaccattgatgattgctcctgta
tttgtagggattataaattgtttatcattcattatgaaacagagacctcatgcagctatt
cgtatatcttcagctctgttaaagttcaatatcgacgccaaattccaatgcgattcaatg
tctccattaaattatagattatcaaaaagatttgttgaacgttcttataaaaattttgtt
caattcggtttaaaagcacaattaattaaaaactctggccaaatgagtaatatatacaca
aaattagctaaaatatctcagactttacatggtattggtgaggaaactaaaacaaagggt
atactaaactttgatgctaagcaaatcgaaaaaccaatgtcagaaaaggataaactgaaa
tatatccagaatgcagcaagtaaaatgaagaaaaatcttaatgacgaaaatcaatatatc
aaatctgatgattcaaagtcaagttcaagctccatatcaggatctacaagtgcaggctct
caaggttcattaaatgaacaaagggaagatagtacttctaaatcacccacaccaacgata
gatgctaccactcagaatctaatgaatttacaaaagtataccatgtccaagaattcttcc
actaactttttcaatacatctccagttgcgtttgataattcttacggttcaatttattct
ctgatgaatagtaaacattctgaacaagatatttcttcgttatcacaagatataatgaca
aaattatgcagtgaagccttatacaatgtcgatactactaggctagtctctggactgtca
attgttgcatccagatatacagaactaatgacaaaatcagtcccttcagattctgatgca
gaatcaaaaaaaagaaagctagacgccgaagctactgaaaatgtagcagccaaaaaggtt
aaaaatgaagatgaacagtttaagaaggaaccatccgatgaagtggttgacgatgaggat
gaatacctggccgatgaggataactatcaagtttccgctgatcaaaagagtgaacctttg
atcattaaaccagcagcgatgtctcatgatgataagataaaacatttgaaacatattgct
aacagaataatgggtataagagattcagatgaagcaactggaatatcaggtgccttagat
caaccaataaatcccttacaaaaagttaagttaatgcagtgggataacaaagaaacctgg
gttcaaatattaacaagattagctactcgcggtgtgagccatgatgaagagatgagtgac
gtaatcagacaaacgctttatgactacttcattgatgatattaacaatagaattgctatt
gtaatcgaatggctgaatgaagaatggttttatgaaactttgatgaacgataaattggaa
gaaaaagatgaaaattcaaatcagcaaacatatgataaatggtcattaaagctgctcgat
ggtcttgtgccatatttggaaaaccaacacagaagaatatttattaggcttgtaagtgaa
cttcctagtcttacccaagaacatatagatagggtgagaccaatttgtctagatcctgca
agaagttcattagggtttcaatcgttgaaatttctattgatgtttagaccaccagttaaa
tcaatgatcaaaaatctattggaacaactgaaagaagaagattccagtacagctgagcaa
tgcaacgccattttaactaaatttttccaatga
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