Veillonella parvula: Vpar_0789
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Entry
Vpar_0789 CDS
T01130
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vpr
Veillonella parvula
Brite
KEGG Orthology (KO) [BR:
vpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpr03016
]
Vpar_0789
Enzymes [BR:
vpr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Vpar_0789
Transfer RNA biogenesis [BR:
vpr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Vpar_0789
Prokaryotic type
Vpar_0789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ACZ24470
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All DBs
Position
929995..930936
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AA seq
313 aa
AA seq
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MDGILPFLKPPGITSHDAVAICRRILKEKRIGHSGTLDPMAYGVLPVFLGKATRLIEYTE
DFDKTYVAECKLGTFTDTEDSSGQTVLPDTNMVLRDGVVLNQAIQSTEISATMVKPSFEE
LVSILKKFAGIQDQRPSKYSAIKVNGIRAYEYARKGIPVELPLRQIHIKNIELIAYGFPF
FTVRVTCTGGTYIRSLLRDICIALGIPGTMTSLARTQVGPFDIGSAKMAEEIMLHGKSLL
LPTDAAVSHLSKVTVNSVQLRMMVQGKELPIEREFSFTEPDNFYRAYGPLGFIGIMRRTN
HSLKVEKNIFIEG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggatggcattttaccatttttaaaacctcctggtattacgagtcatgatgccgttgct
atttgtcgtcgtattttaaaagaaaagcgcattggtcatagtggtacattagatcctatg
gcttatggtgtattgcctgtatttcttggcaaggctactcgccttatagaatacaccgag
gattttgataaaacttatgtagcagaatgtaaattgggtacttttacagatactgaagat
agctcaggacaaactgtattgccagatactaatatggtattgcgtgatggcgttgtattg
aatcaagctattcaatctacagagatctcagcaactatggttaaaccaagctttgaagaa
ctggttagtatcttgaaaaaatttgcaggtattcaggaccaaagaccgtctaagtattca
gctattaaagtaaacggcattcgagcttatgaatatgcccgtaaaggtattcctgtggag
ctaccattacgccaaattcatattaaaaatattgagctcattgcttatggattccctttt
ttcacggttcgcgtgacatgcacaggggggacttatattcgctcattattacgcgatatt
tgtattgctttaggtattcctggcactatgacttctttggcacgtactcaagtagggcct
tttgacatcggttccgctaagatggctgaagagataatgctacatggtaaaagccttttg
ttaccaacggatgcggcggtttctcatctttcaaaagtgactgtaaatagtgtacaatta
aggatgatggtgcaagggaaggaattacctattgaaagggaattttcttttaccgagcca
gataatttttatagagcctatggacctcttggtttcataggtattatgagacgaacaaac
cactcattaaaggtggaaaaaaatatttttattgaaggataa
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