Veillonella parvula: Vpar_0846
Help
Entry
Vpar_0846 CDS
T01130
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vpr
Veillonella parvula
Pathway
vpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Vpar_0846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpr03400
]
Vpar_0846
Enzymes [BR:
vpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Vpar_0846
DNA repair and recombination proteins [BR:
vpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Vpar_0846
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
AAA_19
DAP3
PIF1
nSTAND_NTPase5
Zn_ribbon_ISL3
nSTAND6
AAA_22
T2SSE
Zn_ribbon_6
SLFN-g3_helicase
IBR_1
Motif
Other DBs
NCBI-ProteinID:
ACZ24527
LinkDB
All DBs
Position
988154..990337
Genome browser
AA seq
727 aa
AA seq
DB search
MRVAQVIINRPAKQLHKPLSYLMPEKFGNVLPGTRVLIPLGHSREEGILIGYDELVEPPE
FTLRNIVQVLDSEPWFTPEMMDTARRLNEYYLFSYGDALRLFTVNKTLKSYEAPKEEWLV
VMPEFSVAQFSERKKKQRELAKYLLEVGGASKALLLAKGYSRIVIKQVSEAKGIVVEARF
KATKTTFDELLTEEVNIPLTEAQQAVYGPIQAAMNSHEHKTFLLHGVTGSGKTQLYLRAT
AKCISQDKTAIILVPEIILTDQIVRRFVETFGDEVVVFHSKLTVQQRNNNWERLRRKDSH
IIIGARSAVFAPAEDIGLIVVDEEHDPSYKQEDMVRYHARNVALWRAEAHGCPVILGSAT
PSVTSYYKAKQGEYHLLELPNRIFEQPMPKVTIVDMKEEILHGNYSVFSDAMSRLIQHTL
DEHNQMIILLNRRGYSTFVMCRDCGETIMCPHCDVAMVYHQAGEELRCHYCEHHEPIPTV
CPKCNSKRIKFFGSGTQKVEEELRRHFKSARIARLDQDVTKNKQLAEDILHDFGAHKYDI
LLGTQMVSKGHDFKDVTAVGILTADSVLNIPVYTASERTFDLLTQTSGRAGRGEKPGSVV
IQTYNPLNYAIIKSKAHDYIGFYNEEIKNRKALGYPPFREMIHMVVRHQDMKTLESIANR
IVDDLESYKGNQDILINGPYEAPIKKVRDMYRLAIMIRGTDLTNLKEYIYNSWIFTQEGL
LIDVDPV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtagcacaagttataattaacagaccagccaaacaacttcataaacctttgagc
tatttaatgcctgaaaagtttggtaatgttttacctggtacgcgcgtactcattccttta
ggacatagtcgtgaagaaggcattcttattggttacgacgagttagttgagccaccagag
ttcactttacgaaatattgtgcaagtattagatagtgaaccttggtttacaccggaaatg
atggatacggcccgtcgtctaaatgagtattatttattctcttatggcgatgcattgcga
ttgtttacagtgaataagacattaaaatcttacgaggcaccaaaggaagaatggttagta
gttatgccagaattttcggtggcacaatttagtgaacggaaaaagaaacaacgagaatta
gcaaaatacttacttgaagtgggcggagcatctaaggcattactgctagctaaaggctat
tctcgtatagtcattaaacaagtgagtgaagctaaaggtattgtcgttgaagctcgtttt
aaagccacaaaaacaacatttgatgagcttttaacagaagaagttaatattcctcttact
gaagctcaacaagctgtatatggaccaatacaagctgcaatgaatagccatgaacataaa
acctttttacttcatggtgtcactggtagtggtaagactcaattatatttacgtgctaca
gcaaaatgtattagtcaggataagacggctattattttagtacctgaaattatattgact
gatcaaattgtgagacgatttgtagaaacttttggtgacgaagtcgtagtatttcatagt
aaattgacggtacaacaacggaacaataattgggagcgtttgcgtcgtaaggatagtcac
attattattggcgctcgttctgccgtatttgcgccagctgaggatatcggccttattgtg
gtcgatgaagaacatgatccatcttataaacaagaggatatggttcgatatcatgcacgt
aacgtggcattgtggcgtgctgaggcacatggttgtcccgttattttaggttctgctaca
ccatctgttacttcgtactataaagctaagcaaggggagtatcatttactagagttgcca
aatcgcatttttgagcaacctatgccgaaggttactatagtagatatgaaggaagaaatt
cttcatggaaattactccgttttttctgatgccatgagtcgcttaattcaacatacattg
gatgagcataatcaaatgattattctgttaaatagacgcggttatagtacttttgttatg
tgccgggattgtggggaaactattatgtgtcctcattgtgatgtagctatggtttatcac
caagctggtgaagaattgcgttgtcattattgtgaacatcatgaaccaattccaactgtt
tgtcccaaatgtaatagtaagaggattaagttttttggttcaggcacacaaaaggtagag
gaagagttacgtcgtcactttaaatcggcccgcattgctcgtcttgatcaagatgtgaca
aaaaataagcaattagcagaagatattttacatgactttggggctcataaatacgatatt
ttgttgggaacacaaatggtatctaaaggtcatgactttaaagatgtaacagctgttggt
attttaacagccgattcagttttgaatattcctgtttatacagcttcagaacgaactttt
gatttacttactcaaacctctggacgtgccggtaggggtgaaaaaccgggtagcgttgta
atacaaacatataatcctttaaattatgctataataaagagcaaggctcatgattatata
ggcttttacaatgaagaaattaaaaatcgtaaagctttaggatatcctccatttcgcgaa
atgattcatatggtagtgcgtcatcaagatatgaaaacattagagtctatagcaaatcgt
attgtcgatgacttggagtcttataaaggaaatcaggatattttgattaatggtccttat
gaagcgcctataaaaaaagtgcgcgatatgtatcgtttagctattatgattcgcggtaca
gatttaacaaatttgaaagaatatatatataactcatggattttcacgcaagaaggactg
ctgattgacgtggatcccgtgtag
DBGET
integrated database retrieval system
