Veillonella parvula: Vpar_1000
Help
Entry
Vpar_1000 CDS
T01130
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vpr
Veillonella parvula
Pathway
vpr03420
Nucleotide excision repair
vpr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Vpar_1000
03430 Mismatch repair
Vpar_1000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpr03400
]
Vpar_1000
Enzymes [BR:
vpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Vpar_1000
DNA repair and recombination proteins [BR:
vpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Vpar_1000
MMR (mismatch excision repair)
Other MMR factors
Vpar_1000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
DUF3226
Motif
Other DBs
NCBI-ProteinID:
ACZ24681
LinkDB
All DBs
Position
complement(1157554..1159743)
Genome browser
AA seq
729 aa
AA seq
DB search
MNSLLTGLNKEQQQAVQHTEGPLLILAGAGSGKTKVLTVRIAHLLAQGVNPYEILAITFT
NKAAKEMKSRVEGLVGDVANRIWLSTFHSFCAKFLRFEIDSFLGYNSNFTIYDTSDSQAV
IKAALKALNLDDKYYPVGAMIAAISDAKNKLLFASDFRKQARDFYQQKVADVYEYYEREL
RKNNALDFDDLLLVAVKLLQSNATVLDKYSHRFRYVMIDEYQDTNHAQYLLAKLLASHWK
NIAVVGDADQSIYAWRGADIQNILDFEKDYPNCTSIKLEQNYRSTKIILDAANAVIDNNE
GRPEKNLWTDKIEGAKIQHFTAQSEHEEAAFIGDTIAKKHDIHDVPYGDMAILYRTNAQS
RVLEEALIKRALPYTMVGGTKFYDRKEIKDVLAYLRVLYNPFDDLSLLRIINVPKRSIGA
TTVAKLQDYAREKGTSLFMTLTQLHLIDSIKGKTKEKLEEFGILIFTLVSEMEDKTVLDI
LESILDRTGYLAQLEESTDPQDQARAENIGELLSVAKDFQDTNPSGTVEDFLEQVALVND
VDSFEQEEAKVTLMTLHAAKGLEFPIVFLCGLEEGLFPHSRTLMNPEEIEEERRLAYVGI
TRAEKELYISNATTRTVFGRTSSYLPSRFIDEIPEELVDGLRAKRKVPDDIKRHVPQHMS
VTSRPVTKPIVRNEVIADWKVGDTAIHSKWGNGKVINVTGEGAGMKLTIEFPTQGVRVVM
AKFAPVKKG
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattattaacaggtttaaataaagaacaacaacaagcagtccagcatacggaa
ggccctttattgattttagctggtgctggatctggtaaaacaaaggtcttaacagttcgt
attgcacatttattggcacaaggtgttaatccttatgaaatcttggcgattactttcacc
aataaagcggcgaaagaaatgaaaagccgtgtagaaggtcttgtaggcgatgtggcaaat
cgtatttggctcagtacattccacagcttttgtgctaagtttttacgttttgaaatagat
agtttcttagggtataacagcaattttactatctatgacacatctgactctcaagctgtt
attaaggccgcattgaaagcgttaaatttggatgataaatactatcctgtaggggctatg
attgctgccatatcagatgctaagaataaattactttttgcttctgattttagaaaacaa
gcacgagacttttaccaacaaaaggtagctgatgtttatgagtattatgagcgggagttg
cgcaagaataatgcattagattttgatgatctattattagtagccgttaaattattacag
tctaatgcaactgttcttgataaatatagtcatcgtttccgttatgtcatgattgacgag
tatcaagatacaaaccatgcacaatatttattggcgaaattattagcttcacattggaag
aatattgccgtcgtgggtgatgctgatcaaagtatttacgcttggcgtggcgctgatatt
caaaatatcttagattttgaaaaggactatcctaattgtacatctattaaattagagcaa
aactatcgttctactaagattattctcgatgcagccaatgctgttatcgataataatgaa
ggtcgcccagagaaaaatctttggaccgataaaatagaaggcgcaaaaattcagcatttt
acggctcaatccgaacatgaggaagcagcttttatcggtgacacaatcgctaaaaaacat
gatattcacgatgttccatatggggatatggccattttatatcgtacaaacgcccagtct
cgtgtccttgaagaagcacttattaagcgggccttaccctatacgatggtagggggcaca
aagttctatgatcgtaaagaaatcaaagacgttttagcttatttacgcgtattatacaat
ccctttgatgatttgagcttattgcgcatcattaatgtgccaaaacggagtattggggcc
actacagttgctaaactacaagactatgctcgtgaaaaaggaacgtctttgtttatgacg
cttacgcagttacacttaattgattctatcaagggaaaaactaaagaaaagttagaagaa
ttcggtattctcatctttactcttgtttctgaaatggaagataaaactgtactcgatatc
ttagagtctattctagatagaacaggttatttggcacaattagaagagagtacagaccca
caagatcaagctcgtgctgagaatattggtgagcttttatctgtggcaaaagacttccaa
gatacaaatccatctggtactgtagaggactttttagagcaagtagcacttgttaacgat
gtagactccttcgaacaagaagaggctaaagtgacattgatgacattacatgctgcaaag
ggtttggaatttcctatcgtattcttatgtgggttggaagaaggtttattccctcatagt
cgtaccttgatgaaccctgaagaaattgaagaggaacgtcgtcttgcttatgtaggtatt
acgcgtgctgaaaaggaattatatatttctaatgccactactagaaccgtatttggccgt
actagtagttatttaccatctcgatttatcgatgaaattcccgaagaattagtagatggc
ttacgtgctaagcgtaaagtgcctgacgatattaaacgtcatgtaccccaacatatgagt
gttactagccgccctgtgacgaagccaattgttcgtaatgaagtaattgccgactggaag
gtgggcgatacggctattcatagtaaatggggtaatggtaaagtaatcaacgtaactggt
gaaggggcgggtatgaaattgactatcgagttccctacacaaggtgtacgtgtcgtaatg
gcaaaatttgcgcctgttaaaaagggatga
DBGET
integrated database retrieval system
