Veillonella parvula: Vpar_1235
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Entry
Vpar_1235 CDS
T01130
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
vpr
Veillonella parvula
Brite
KEGG Orthology (KO) [BR:
vpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpr03009
]
Vpar_1235
Enzymes [BR:
vpr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Vpar_1235
Ribosome biogenesis [BR:
vpr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Vpar_1235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ACZ24915
LinkDB
All DBs
Position
complement(1413348..1414265)
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AA seq
305 aa
AA seq
DB search
MNEYIVSAEQEGMRLDVFLTEQMEGSRSYIQSLIKGGHVTVGGKVGKANLRLTPDTVIRV
EIPEPESIEVKPEDIPLDYLYEDHDIVIVNKPRGMVVHPAVGNYSGTLVNALLFHCKDLS
GINGEIRPGIVHRLDKDTSGVMMVAKNDAAHIGLAEQVKAHSARRTYWALVQGNIVEEKG
TIKAPIGRHPKDRMKMAVVFENSKDAVTHFKVLARYGHQTLVECNLETGRTHQIRVHFVY
IGHPVVNDPFYGYRRMDFPIEGQALHSKSLDVKHPITGEEMHFEAPVPADFKACLEFAKT
YREDK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaatatattgtaagtgctgagcaagaaggcatgagactagatgtatttttaact
gaacagatggaaggatctcgtagctatattcaaagtttaattaaaggtggtcatgttaca
gtaggtggtaaagtagggaaggctaatcttcggcttacacctgatactgtaattcgtgta
gagatcccagagcctgaatcaattgaggttaaacccgaggatattcctttagattattta
tatgaagatcacgatattgttattgttaataaacctcgtggcatggtggtgcatcctgca
gtaggaaattattctggtacacttgtaaatgctttattattccattgtaaggacctatca
ggtattaatggtgaaattagaccgggtattgtgcatcgcttagataaagatacgtctggt
gttatgatggttgcaaaaaatgatgcagcgcacattggtctagcagaacaagtaaaggca
cattctgcaagacgtacgtactgggcgctagtacagggtaatattgtagaagaaaagggg
actattaaggcgcctattgggcgccatccaaaagaccgtatgaaaatggctgtagtcttt
gaaaacagtaaagatgcagtaacacatttcaaagtattagcgcgttatggtcatcaaacc
ttggtagagtgtaatttagaaacaggtcgaacacatcaaattcgtgttcactttgtttat
attggacatcctgttgttaatgatccgttttatggatatagacgtatggattttcctata
gaagggcaagcattacattctaaatcgttagatgttaaacaccctattacaggtgaagag
atgcattttgaagcaccggtaccagctgattttaaggcatgcttagaatttgctaagacc
tatcgtgaagataaatga
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