Veillonella parvula: Vpar_1359
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Entry
Vpar_1359 CDS
T01130
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
vpr
Veillonella parvula
Brite
KEGG Orthology (KO) [BR:
vpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpr03032
]
Vpar_1359
03036 Chromosome and associated proteins [BR:
vpr03036
]
Vpar_1359
03400 DNA repair and recombination proteins [BR:
vpr03400
]
Vpar_1359
DNA replication proteins [BR:
vpr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Vpar_1359
Chromosome and associated proteins [BR:
vpr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Vpar_1359
DNA repair and recombination proteins [BR:
vpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Vpar_1359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_euk_1
DUF2530
Motif
Other DBs
NCBI-ProteinID:
ACZ25037
LinkDB
All DBs
Position
complement(1552473..1552772)
Genome browser
AA seq
99 aa
AA seq
DB search
MNKTELIASVAQKTELTKKDAEKAVKAVFDTVAQELAAGGKVQVIGFGTFEVRERAAREG
RNPQNGKTITIAASKSPAFKAGKGLKEQVNAAKAKKRKK
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagaattaatcgcaagtgttgcacaaaaaactgaattaactaaaaaagat
gctgaaaaagcagtaaaagctgtatttgacacagtagctcaagaattagcagctggtggt
aaagtacaagttatcggcttcggtactttcgaagttcgtgaacgcgcagctcgtgaaggc
cgtaacccacaaaacggtaaaactatcacaattgcagcttccaaatctcctgcattcaaa
gctggtaaaggtttgaaagaacaagttaacgctgcaaaagctaaaaaacgcaaaaaataa
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