Veillonella parvula: Vpar_1375
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Entry
Vpar_1375 CDS
T01130
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vpr
Veillonella parvula
Brite
KEGG Orthology (KO) [BR:
vpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpr03400
]
Vpar_1375
DNA repair and recombination proteins [BR:
vpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Vpar_1375
Archaeal homologous recombinant proteins
Vpar_1375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
YBL028C_N
Motif
Other DBs
NCBI-ProteinID:
ACZ25053
LinkDB
All DBs
Position
complement(1580887..1582248)
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AA seq
453 aa
AA seq
DB search
MRFLHTADWHLGRIFYGQYLTEDQAHVLEHQFFNILKDENIDGILLAGDIFDRAVPPIEA
IELWDSIITRLAMDYKVPLFVVSGNHDGAERLEVGRSMLGQSGIHIWGSPHHALKPFEFE
GTDGKVAICPMPFSEPRRIGEALGLSSANTTSATVQNLESVETKTKAKSKRSKSKKSFQD
VIEGSLFADVEDINAESTDTEIADIVTQCYEQNCESTLNLHNYDQMYQAWSDYLYKQVPK
GMRSIAISHAFVMGGEVGGSERTLSVGGSEQVNPQAFKDFHYTALGHLHGSQRMGADRIR
YSGSPLKYSFDEHMQKKSFTIIDMDTKGTVDISTIPVEVKRDVVILEGYFEDLLNDKVLQ
AKHRDDYVQARLLDTMPIMDGMAKLRQVYHRCMTIDLVGRMAGPIADMGEAIFKELNERD
LFNQFAETVWKEPLTEKEQQYINSVWDRILKED
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttttacatactgccgattggcatttagggcgtattttttatggccagtactta
acagaagatcaagctcatgtgttggaacatcagttttttaatattttgaaagatgaaaac
atcgatggcatattgctcgcaggggatatttttgatagagcggtgccacccattgaagct
atcgaattgtgggactctataattactcgtctcgctatggactacaaggtgcctctcttt
gtggtgagcggtaatcacgatggggcggaacgtcttgaagtggggcgctccatgttggga
caatcgggtattcatatttggggctctcctcatcacgctttaaaaccttttgaatttgaa
gggacagatggcaaggtggcaatttgtcctatgccttttagtgaacctcggcgcataggg
gaggctttgggcttaagttctgctaatactacttcagcaactgttcaaaatctggagagt
gtagaaactaagactaaagcaaagtcaaaacggtctaaatcaaagaagtcatttcaagat
gttatagaaggctctttatttgctgatgtagaggatattaatgcagaatctaccgatact
gaaattgctgacatagtaacacagtgttatgaacaaaattgcgaaagcactttgaatctg
cataattatgaccaaatgtatcaagcttggagtgactatttgtataaacaggtgcctaag
gggatgcgtagtatcgccattagccatgcttttgttatgggcggtgaagtagggggctca
gagcgtaccttgtctgtaggtggcagtgaacaggtaaatcctcaagcctttaaagatttt
cactatactgccttgggacatttgcatgggtctcaacgaatgggtgcagatcgtattcgc
tatagtggctctccattaaagtattcctttgatgaacatatgcaaaagaagtctttcacc
atcattgatatggatacaaaggggaccgtagatattagtacaattcctgtagaggtgaag
cgagatgtagtcattttggaaggatattttgaagacctgttaaatgataaagtattacag
gctaaacatagggatgattatgtgcaagctcgtttacttgatacgatgccgattatggat
ggaatggctaaactgcgccaggtatatcatcgttgtatgaccattgatctagttggtcgc
atggcagggcctatagcagatatgggtgaggcaattttcaaagaattaaatgaacgggat
ctatttaatcagtttgcagaaactgtgtggaaggaacctttaacagagaaagaacagcaa
tatattaactctgtatgggaccgaattcttaaggaggactaa
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