Veillonella parvula: Vpar_1376
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Entry
Vpar_1376 CDS
T01130
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vpr
Veillonella parvula
Pathway
vpr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Vpar_1376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpr03400
]
Vpar_1376
Enzymes [BR:
vpr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Vpar_1376
DNA repair and recombination proteins [BR:
vpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Vpar_1376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ACZ25054
LinkDB
All DBs
Position
complement(1582494..1583330)
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AA seq
278 aa
AA seq
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MFVIGSHLSISKGYLHMGKEATKIGGNTFQYFTRNPRGGSMRALDVEDMNNLSAYMKEHN
FGTLLAHAPYTYNPCAAKEDLRAFAKQSMMEDLERMEYLPGQMYNFHPGSHVKQGVDQGI
EYIVECLNEILFPGMKTTVLLEVMAGKGTEIGSRFEEIARIIDGVKLKEYMGVCVDTCHI
HEGGYDIVHNLDGVIDEFDRIVGLDRLKAIHLNDSKNPMGAHKDRHEKIGEGHIGIDAIA
RVVTHPKLTNLPFYLETPNELDGYAKEIAMLRSIVENK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtaataggcagtcacttatcaattagcaaaggttatttacatatgggcaaggaa
gcgactaaaattgggggcaatacgttccaatactttactcgcaaccctcgcggtggtagc
atgcgagctctcgatgttgaggatatgaataaccttagcgcatatatgaaagaacacaac
tttggtaccttgttagcacatgcaccgtatacctataacccatgtgccgccaaagaggat
ttacgcgcttttgcgaagcaatctatgatggaagatttagagcgtatggaatatttgcca
ggtcaaatgtataactttcacccaggtagccatgtgaaacaaggcgtagatcaaggtatt
gaatacattgtagagtgcttgaatgaaatcttatttccaggcatgaagacaacagtcctt
ttggaagtaatggctggtaagggtacagaaattggttcccgttttgaagaaattgcacgc
atcattgatggtgtaaagctaaaagagtacatgggtgtgtgcgttgatacttgtcacatt
cacgaaggcggttatgatatcgtgcataatcttgatggcgttattgacgagttcgatcga
attgtaggtcttgatcgtttgaaagccattcatttaaatgactctaaaaaccctatgggt
gcccataaagatcgtcatgaaaaaattggggaaggacatattggtatcgatgctattgct
cgcgttgtaacacatcctaaattgacgaacctgccattctacttggaaacgccaaatgaa
ttagacggatacgcaaaagaaattgctatgttgcgctctatcgtagagaataaataa
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