Veillonella parvula: Vpar_1406
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Entry
Vpar_1406 CDS
T01130
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vpr
Veillonella parvula
Pathway
vpr03030
DNA replication
vpr03430
Mismatch repair
vpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Vpar_1406
03430 Mismatch repair
Vpar_1406
03440 Homologous recombination
Vpar_1406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpr03032
]
Vpar_1406
03400 DNA repair and recombination proteins [BR:
vpr03400
]
Vpar_1406
Enzymes [BR:
vpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Vpar_1406
DNA replication proteins [BR:
vpr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Vpar_1406
DNA repair and recombination proteins [BR:
vpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Vpar_1406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF7443
DUF1980_C
Motif
Other DBs
NCBI-ProteinID:
ACZ25084
LinkDB
All DBs
Position
complement(1619996..1623403)
Genome browser
AA seq
1135 aa
AA seq
DB search
MQPFVHLHSHTEFSLLDGISRLPDMVRRAKELNQPALAITDHGNMYAAIYFYKECMAQGV
KPIIGCEVYVTENNRFDRPEGRSRERLKHLILLAETMEGYRNLVKIVSKASTEGMLYRPR
ADRDLLRQYSKGIIALSACIQGEIPQYILQDNMEGAKRSIEWYIETYGKDNFFLEIQNHG
LPEEAKAQEELIKLSKEYGLGIVASNDFHYVLKEDADAQDIKVCISTGRRRAEVDRLKFP
NDEFYLKSGDEMAELFGHIPGAIENTLKIAERCNVEFNFDEHHLPHFDVPEGETSKTYLR
KVCEREIPRLYGETSEELQKRLDYELDVIGTMGFEDYFLIVWDYVRYAREHDILVGPGRG
SAAGSVVAYLLGITGLDPLKYDLLFERFLNPERVSMPDIDIDFCYEKRGQAIEYVTRKYG
QARVSQIITFGTEAARAVIRDVGRVLDLPLAEVNRIAKMIPNELGITLDKALQGKELKAL
YEADPNVKELFDFGKKLEGIARNSSTHAAGVVISADPLDDHVPVQNANDEGFVTQYDKDN
IEELGLLKMDFLGLRTLTVMGDALKLIKANRGIDLDLDAIPLDDKAACDLLTKGDTSGVF
QLESEGITKLVMDLKPEHFEDLIPLVALYRPGPLGSGMVADFIDRRHGKKEVTYLHPILE
PILKDTFGVILYQEQVMQIASAMGGFSLGQADLMRRAMGKKKESVLKAQRESFIQGSVKN
GIDESVANEVFDLLVYFAGYGFNKSHSAAYAYIAYQTAYLKAHYFPEFMAATMTSFMQNM
QKLTYYINSCKKHNVKVLGPDINYSERSFAVQDDAIRFGLGGIKNVGDNAIDRLIRERNE
HGLYTDIVDFCKRVDNKVVNKRLLESLIRCGSMDGFKENRNQLLHMYESAQAVGAKEQKD
AAMGTMNLFGDMEEAVDFIPVPNVEDLSEDDKLKDEKEYTGFYITGHPLQGYAKELEGLF
ELGALAENPEQYDGQTITFGGLIENKSDRMTKRNEVMSILRIEDYSGAANVVAFPKVFSQ
SQQFLAVDMIVKVKGRVDADEKGVQIIADRITPLKVNYSQAKQVAIHIYSQYDTPENSEV
LKRVLTSTAGSVPTSLYLHRQRKRINLPPNMCFDPSDESIKAIEAILGEGSVEVQ
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgcagccatttgtacatttacatagtcatacagagtttagtttgctggacggcatcagt
cgtttgcctgacatggtacgtcgtgcgaaggagttaaatcagccggcccttgccattaca
gatcacggcaatatgtacgcagccatttatttttacaaagaatgtatggcccaaggcgtt
aagcctattatcggttgtgaagtatatgtaacggaaaataatcgattcgatcgtccagaa
ggtcgcagtcgtgaaagactaaaacatcttatccttttggctgagaccatggaagggtat
cgtaatcttgttaaaatcgtatcgaaagcatctacagaaggtatgttatatcgcccacgt
gcagaccgcgatctattgcgtcaatatagcaaggggattattgccctcagtgcttgtatt
caaggagaaatccctcagtatatcttgcaagataatatggagggcgcgaagcgttccatc
gaatggtatattgagacgtacgggaaagataatttcttcttggaaatccaaaatcacggg
ttaccagaagaagcaaaggcacaagaggagctcatcaagctcagcaaggaatacggtctt
ggcatcgtagcgtctaatgatttccattatgttttaaaagaggatgcagacgctcaggat
attaaggtttgtatttctacaggtcgtcgccgtgctgaggtagaccgcttaaaattcccg
aatgatgagttctatctcaagtctggggatgaaatggcagagctatttggacatattccg
ggggccattgaaaacaccttaaaaattgctgagcgctgtaacgtagaattcaacttcgac
gaacatcacttgccacactttgatgtgcccgaaggggaaacgtctaaaacgtatttacgt
aaggtttgtgaacgagaaattccacgcctttatggtgaaacgtctgaagagttacaaaag
cgtctcgactacgagttagatgttatcggtacgatgggttttgaggattacttcctcatc
gtgtgggattatgtgcggtatgcccgtgagcacgatatcttagtaggaccaggccgtggt
tctgcggcaggttctgtagtagcgtaccttttaggtattacaggtctcgatccactaaaa
tacgatttgctctttgaacgattcttgaatccagaacgggtaagcatgcccgatattgat
attgacttctgctatgaaaagcgtggtcaagccatcgaatatgtgacgagaaaatacggt
caagctcgtgtatcccagattattacgttcggtacagaggcagcgcgtgctgtaattcgt
gacgtaggtcgcgtgctcgacttaccactagccgaagtaaaccgcatcgctaagatgatt
cccaacgaactggggattaccttagataaggctctacaaggcaaagagttaaaagcttta
tacgaagccgatccaaatgttaaagagttatttgattttggtaaaaagctagaaggcata
gcgcgaaattcgtccactcatgcggcgggcgttgtaatttctgcagatcctttagatgac
catgtaccggtacaaaatgccaacgatgaaggctttgtaacgcagtacgataaggacaat
atcgaggagttaggcctcttaaagatggatttcttgggtctccgtaccttgacggttatg
ggggatgccttaaagctcattaaggctaaccgtggtatcgacctcgacttagatgctatc
ccgctcgatgataaggcggcttgcgacctcctcacaaagggcgacacttctggtgtattc
cagctcgaatcggaaggtattacgaagcttgttatggaccttaagcctgagcattttgaa
gacttaattccattggtagccttgtatcgtccaggcccactaggctctgggatggtggcg
gactttattgaccgccgtcacggtaaaaaagaggttacctatttacatccaattttagaa
ccgattttaaaagatacctttggtgtaatcttataccaagaacaggttatgcagattgcc
tccgccatggggggattctcccttggtcaagcggatttgatgcgccgtgccatgggtaag
aaaaaggaatctgttctaaaggcgcagcgggagtcctttattcaaggctccgttaaaaac
ggtattgatgaatccgtggcgaatgaagtatttgatttgctcgtatacttcgccggctac
ggctttaataaatcacatagtgcggcgtatgcgtatatcgcgtaccaaacagcgtacttg
aaagcccactatttccctgaatttatggcggctaccatgacgagctttatgcaaaacatg
caaaagttgacgtattacatcaactcctgtaagaagcataatgttaaggttctaggccca
gatattaattattctgaacgcagctttgccgtacaagacgacgctattcgctttggtctt
ggcggtatcaagaacgtaggggataatgctatcgatcgcttgattcgtgagcgcaatgag
catggtctctatacggatatcgtggacttctgcaaacgggtggacaataaggttgttaat
aaacgacttcttgaaagtctcattcgctgcggctctatggatggcttcaaggaaaatcgt
aaccaattgttgcacatgtatgaaagcgcacaagccgttggtgctaaagagcaaaaggat
gccgctatgggcactatgaacctctttggcgatatggaagaagctgtcgattttatccct
gttcctaatgtggaggatttatcggaagacgataaattaaaggatgaaaaggaatacact
ggcttttatattacaggtcatccattgcaaggttatgcgaaggaattagaaggtctcttt
gaactgggcgctctcgcagaaaatccagagcaatacgatggtcaaaccattacctttggc
ggtcttatcgaaaataaatcggaccgcatgacaaagcgcaatgaggttatgtccattctt
cgcatcgaagattattctggtgcggctaatgtagtggcattccctaaggtctttagtcaa
agtcaacaattccttgcggtcgatatgattgttaaggtaaaaggtcgagttgatgcggat
gaaaagggtgtgcaaatcattgcagatcgtattacgccattaaaggtaaactatagtcag
gcaaaacaggtggcaatccacatttatagccaatatgatacaccagaaaatagcgaagtc
ttaaaacgcgtgttgactagcactgctggctccgtgccaacatcgctatacttacaccgt
caacgaaaacggattaatttaccaccaaatatgtgctttgaccctagtgatgaatccatc
aaggctattgaagctattctaggcgaaggctccgtagaggtgcagtaa
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