Veillonella parvula: Vpar_1467
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Entry
Vpar_1467 CDS
T01130
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vpr
Veillonella parvula
Pathway
vpr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vpr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Vpar_1467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpr03021
]
Vpar_1467
03400 DNA repair and recombination proteins [BR:
vpr03400
]
Vpar_1467
Enzymes [BR:
vpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Vpar_1467
Transcription machinery [BR:
vpr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Vpar_1467
DNA repair and recombination proteins [BR:
vpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Vpar_1467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACZ25143
LinkDB
All DBs
Position
complement(1684269..1685273)
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AA seq
334 aa
AA seq
DB search
MSEEKKLKIEKVDIADGGRYGKFVCEPLDRGYGITLGNSLRRILLSSLDGAAITSIKIDG
VLHEFSTIPGIREDVTDIILNLKQLCIKVEEEAQLPLEVHFDFQKDGILTATDLAEQFPP
EVEVLNPELVIATMDETAHLVMDVVIERGKGYVPSTKNKKDTDVIGCIPIDSIFSPILRA
KYEVSDVRVGNEMDFDKLTLEVWTDGSITAADAVAKSAAIMIGYLGNFTKLAHSADVVDV
NTGEGGIVIDPVGSDNEEPAVDDGPAKISIDELELSVRAYNCLKRAGINTIADLLDKTID
DLGKVRNLGKKSIDEIEEKLNNHPGGFQLKQKGE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaagaaacttaaaatcgagaaagtggacatcgccgatggcggtcgttat
ggtaagttcgtatgtgaaccattagatcgtggttatgggatcactctcggtaatagctta
cgcagaattttgctttcatccttggatggggcagctatcacctctatcaaaattgatgga
gttcttcatgaattctctactattcctggtattcgcgaagacgttacggatattatcctt
aacttaaagcaattgtgcatcaaagttgaagaagaagcacaattacctttggaagttcat
ttcgacttccaaaaggatggaatattgacagctactgatttagctgaacaattcccgcca
gaggtagaagtattgaatcctgaactcgtgattgcgacaatggatgagacagctcatctc
gtaatggacgtagtaatcgaacgaggtaaaggctatgttccttcaacgaagaataaaaaa
gatactgatgttattggttgtattccaatcgattccatcttctctccaattcttcgtgct
aaatacgaagtgagtgatgttcgtgtaggcaatgaaatggacttcgacaagcttacatta
gaagtttggactgatggctccattactgctgctgatgcagtggcaaaatctgctgccatt
atgattggttatttagggaacttcactaaattagcgcattctgcagatgttgtagatgta
aacactggtgaaggcggtatcgttatagatccagtaggttccgataatgaagaaccagct
gtagatgacggcccagcaaagatttccatcgacgagttggaactctctgttcgtgcgtat
aactgcttgaaacgtgctggcattaatacaattgcagacttgctagacaaaaccattgat
gacttaggaaaagttcgcaacttaggtaaaaaatctatcgatgaaattgaggaaaaactc
aataatcacccaggtggttttcaacttaaacaaaaaggcgaataa
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