Veillonella parvula: Vpar_1685
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Entry
Vpar_1685 CDS
T01130
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
vpr
Veillonella parvula
Pathway
vpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Vpar_1685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpr03019
]
Vpar_1685
Messenger RNA biogenesis [BR:
vpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Vpar_1685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
ACZ25361
LinkDB
All DBs
Position
complement(1937359..1939521)
Genome browser
AA seq
720 aa
AA seq
DB search
MLNKLMNKILGGTVNTTDNQVTAQVKAEPTVAKNATLTAAAEGEQKQTRRRTNTRRPAGE
GRTRQQTAGEGATRQRRTTNTRTSANSGRTNTTRRTNTRRNAEQGEGQERKTRQTRAPRG
ENTRNTRTNNGRNGQNGQNRNNNRPNNRSTGWNNQEEQVELVGRTPNGVNKGKFQIIPLG
GLGEIGKNMTIFQYEDEIIVLDSGLAFPSEDMLGVDIVIPDMSYIIENKDRVKAVVITHG
HEDHIGSLAYLMKEISCPVYATNLVCGLIEGKFKEHKVSPKCLRTIAAGDEVQIGQVTVG
FIQTNHSIPDSCAVYFNTPIGTILHTGDFKIDQTPVDGRLMDMHKFAELGNKGVLALLSD
STNVEKPGTTGSESSVGPAIKQAVGEAKGRVVLATFASNVSRIQQAIDAAVMFNRKVVVM
GRSMVNVTEIAQERGYLNIPPNIIIDVDVMHNYTDDQIMILTTGSQGEPMAGLSRMATSN
HRTVELAPNDTVIISATPIPGNEGAVGRTIDNLLRLGCNVVYGKDRGIHVSGHASQEELK
TMLNLVRPEYFIPVHGEYRMLRRHGELGVAMGVDPKKVLIGDNGQIFEFDKDGGRKGGRV
QAGAIFVDGLGVGDVGNIVIRDRQQLAQEGMVIVVMAMDKASGTIVAGPDLVSRGFVYVR
DAEELMLAAERRVEQVLEDCEMQRIKDWTTIKQNVRDALGKFFYDKTRRRPMILPIIQDV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttaaataaattaatgaacaaaattttaggaggaactgtgaatacaacagataatcag
gttactgcgcaagtgaaagcagagccgacagtagcaaaaaacgctactcttacagctgcg
gctgaaggcgagcaaaaacaaacgcgtcgccgtacaaatacacgccgccctgctggcgaa
ggtcgtacgcgccaacaaacagctggtgaaggtgcaacacgccaacgccgtactacaaat
actcgcacaagtgcgaatagtggtcgtactaatacgactcgccgtacaaatacacgccgc
aatgcggaacaaggtgaaggtcaagaacgcaaaactcgccaaactcgtgcaccgcgtggt
gaaaatacacgtaatacgcgtactaataatggtcgcaatggccaaaatggtcagaatcgc
aataataaccgcccaaataaccgttctacgggttggaataatcaagaggaacaagtagaa
ttagtcggtcgtacgccaaatggcgtcaacaagggcaaattccaaatcatcccactaggt
ggtcttggtgaaatcggcaaaaatatgaccatcttccaatacgaggacgaaattatcgtt
cttgactctggtcttgcgttccctagtgaagatatgcttggcgtagacatcgttattcct
gatatgagctatatcatcgagaataaggatcgcgtgaaagctgtcgtaattactcatggt
cacgaggaccatatcggctccttggcgtacctaatgaaagaaattagctgcccagtatat
gcaacaaatctcgtttgtggcttaattgaaggcaagtttaaagaacataaggtatctcca
aaatgtcttcgtacgattgctgccggcgatgaagttcaaattggtcaagtgactgttggt
ttcatccaaacaaatcactccattcctgactcctgcgctgtatactttaatacaccaatc
ggaacaattcttcatacaggggactttaaaattgaccaaactcctgttgatggccgtttg
atggatatgcacaaatttgctgagctaggtaacaaaggtgtattagcgctcttgtcggat
tctacaaatgtagaaaaaccaggtactaccggctctgaaagttccgtaggccctgcgatt
aaacaagctgttggagaagcaaaaggccgcgttgttttggcaacatttgcatccaacgta
tcccgtatccaacaagctattgatgcggcggttatgttcaaccgtaaggttgtagttatg
ggccgtagcatggtcaatgttacagaaattgcccaagagcgtggatacttgaatattcca
ccaaatataattatcgacgttgatgtaatgcacaactacacagatgaccaaatcatgatc
ttaacgactggttctcaaggtgaaccgatggcaggcttgtcccgtatggcaacaagcaat
catcgtactgtagaattggcaccgaatgatacggttatcatttctgctacaccaattcca
ggcaacgaaggtgctgtaggtagaactatcgataacttgcttcgtttaggttgtaatgtg
gtatacggtaaagaccgtggtattcacgtatctggtcatgcgagccaagaagagcttaaa
acaatgcttaaccttgttcgtccagaatactttatcccagttcatggtgagtatcgcatg
ttgcgccgtcatggtgaactcggtgttgctatgggtgtagatcctaagaaggtccttatc
ggcgacaatggtcaaatctttgaattcgataaagatggtggtcgcaaaggcggtcgcgta
caagctggcgctatctttgttgatggtcttggtgttggtgacgtaggtaatatcgttatc
cgcgaccgtcaacaattggcacaagaaggtatggttatcgtcgttatggcgatggataaa
gcttccggtactatcgtagctggtccagacctcgtatctcgtggcttcgtatacgttcgt
gacgcagaagaactcatgcttgctgcggagcgccgcgtagaacaagttcttgaagattgt
gaaatgcaacgcatcaaagattggacaaccattaagcaaaacgtacgtgacgcattgggt
aaattcttctatgataaaacccgtcgtcgtcctatgatcctgccgattattcaagacgta
taa
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