Vespula pensylvanica (western yellowjacket): 122627027
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Entry
122627027 CDS
T07720
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03008
Ribosome biogenesis in eukaryotes
vps03013
Nucleocytoplasmic transport
vps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122627027
03015 mRNA surveillance pathway
122627027
03008 Ribosome biogenesis in eukaryotes
122627027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vps03019
]
122627027
03009 Ribosome biogenesis [BR:
vps03009
]
122627027
Messenger RNA biogenesis [BR:
vps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122627027
mRNA cycle factors
Stress granule specific factors
122627027
Ribosome biogenesis [BR:
vps03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122627027
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
TAP_C
LRR_NXF1-5
NTF2
LRR_4
LRR_6
LRR_8
DUF6765
UBA_8
Motif
Other DBs
NCBI-GeneID:
122627027
NCBI-ProteinID:
XP_043663699
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All DBs
Position
2:4137430..4139428
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AA seq
534 aa
AA seq
DB search
MSTLKNNDVSGEPLRLTHIKPSFDAEELALASRQDLWHKFIVLNCQPHGKAEILKAIINA
CEPEILLPVMYKRENENKSTFLAKCNSGAIENLVKQCLCIILPGGYEIYIDIILGFINTR
ELPLNPNKIIAQSLYQRYESVKKILNLDDFENDRLLNSIFCPISIPKIFHFVLRCTKQGV
MGNNRESRLSVRELSLKHNNLTAIILFEKFFNFHLTKLDLRYNQILDVEYLRYFSEFKIT
ELWLDGNPLCTQYKNAQEYIQAVKNIFQHLQKLDGVIIGMEKKFIPNIQNQYLKDGSKLP
LIKQFVKHFFIMYDQEDRSIMNGLYDKNALYSMTLGAGTNYVHKQVAKAFVTNRNLLKFV
DYAKCHEFLLRGPDKIISVLRRQPPTLHDIRTFSIDLLYESNNLLAISVQGLFSYKEISS
PPMIFNRTFIIVGKEDNEYCITNDQYFIDGPYPNNLIQINNEMKHDIKNICVFVPTMFSP
SEKNQLVVFLQELTSMNSTFSLKFLENVNWDIRRAIMNFIKMYTLNDVPPEAFE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgttaaagaacaatgatgtttctggcgaacctctacgattgacacatatcaaa
ccatccttcgacgctgaagaacttgccctagcatcacgccaagatttgtggcataagttt
attgtattgaattgtcaaccacacggaaaagcagaaatattaaaagccatcataaatgcc
tgcgaaccagaaattttgttacctgttatgtataaaagagaaaatgaaaataaaagtact
tttctggctaaatgtaattctggtgctattgaaaatcttgtaaagcaatgcttgtgtata
atattacctggtggctatgaaatatatattgatattatattaggattcattaatacacga
gaattaccattgaatcctaacaaaataatagcacaatcgttataccaaagatatgaatca
gtgaaaaagatacttaatctagatgactttgaaaatgacagattattaaactcaatattt
tgcccgatatctatcccaaagatatttcattttgttttaaggtgtaccaaacaaggtgtt
atgggcaataatcgtgaatctagattatccgttcgtgagctaagtttgaaacataacaat
ttgacagccattatattatttgaaaagttctttaattttcatttaactaaattagattta
agatacaatcaaatattagatgttgaatatttacgttacttttctgaatttaagataact
gaactttggttggatggaaatcctttatgtacacaatataagaatgcacaagaatatata
caggctgtaaaaaatatcttccaacatttacaaaaattggatggagtaataataggtatg
gagaagaaatttataccaaatattcaaaatcagtatcttaaagatggttctaaattgcca
ttaataaaacaatttgtgaaacatttttttataatgtatgatcaagaagatagatcaatt
atgaatggtctctatgataaaaatgcactttactctatgaccttgggagctggcacaaat
tatgtacataagcaagtagctaaagcatttgttacaaatagaaatttactcaaatttgta
gattatgccaaatgtcatgaatttttattacgtggtcctgataaaataatttcagtattg
aggcgtcaacctcccacattacatgacattcgcacatttagtatagatttattatatgaa
agtaataatctcttagccatatccgttcaagggttattttcttataaggaaatttcttct
cctcctatgatattcaatagaacatttattatagttggtaaagaagataacgaatattgt
ataactaatgatcaatactttattgatggaccttaccccaataatttaatacaaattaat
aacgaaatgaaacacgatattaaaaatatatgtgtatttgtcccaactatgtttagtcca
tcagaaaaaaatcaactagttgtatttttacaagaattgacatcaatgaattcaacattt
agcttaaaatttttagagaatgttaattgggatataagacgcgcaatcatgaattttata
aaaatgtatacactgaatgatgtacctccagaagcttttgaataa
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