Vespula pensylvanica (western yellowjacket): 122627083
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Entry
122627083 CDS
T07720
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13191
RNA-binding protein 16
Organism
vps
Vespula pensylvanica (western yellowjacket)
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vps03021
]
122627083
03041 Spliceosome [BR:
vps03041
]
122627083
Transcription machinery [BR:
vps03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122627083
Spliceosome [BR:
vps03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122627083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Stonustoxin_helical
Motif
Other DBs
NCBI-GeneID:
122627083
NCBI-ProteinID:
XP_043663798
LinkDB
All DBs
Position
2:complement(1555176..1566311)
Genome browser
AA seq
1568 aa
AA seq
DB search
MEAVKAFNAELSALYDVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGMEKDVFAPRFAKNMQTTFLNLLKCPQEDKSKVIRVLNLWQKN
AVFPPEVIQPLFDLADPNHPIHKEQPVNANGTLNTSSGNNLSNISAVTKTPPSAVKVVAK
DQKLFSSTKPIDPVWLAQTKIETANIGQSNANQVDSSFLDQLQHLQQLLLKKQEATNESK
TSVKFDKKLLDFDYGEEEDDDVVVASSPTTATAAASQHNAVSTSNSLESLGLLLTNPEVL
RQLQTLQQTMQGNMSSSQHEMEEKMRKLQQMKQQEEEFDKHLAQTVPNLPFASECELKPT
DILKPNQQSTYSTSTTTGVIQDMTQPPPGYPPAMPYVSQPLSNMRQINQTGHQNQKSPLI
DERQESQDFSGNGARRDSSSVEIVNCDNTRSQSRSPERYRHHSRSRSPRHRDRDRDRDRD
RKSRSRSRSRRRRSRSRDRGRDRKRDDSREKMTEEEREKERERRKRGLPPIIRDKLSVCS
TTLWVGHLSKLVHQEELSDTFGEFGDIVSIDLISPRGCAFICMNRRQDAYRALTKLKNHK
MQGKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWNKLLNITDQDLELLEEGGMIDEDT
LPPNLKGKLKHSGGNIDIMQHQLQMQQQALAAASQQQTQLVDTSQPPPIRPPTSAALLPP
PNTQLQMMPSAFTMTGVPRMIGPMGLPMAHSLMPNVPIGVPPPNMQSLLGPPGMMQTMLT
PPVNSPFGASVGVGLLTQIPLPAPAAPSDKPNSTGMPHNVPPIGVPPPTSETNIPNLPML
RQSYGVGPAPPMQMQLPQHHSDDMDVEMEDAMPLNVSNNTSKEKPNLSDQLIAAMNMGAG
TSDNRLENDQQNIDYKERDRDRENRDRRDRERDRSDRSDVNDSRMDRGRDRGRGRDRGRD
RRRDARDGRERDRDDRRDRDNRDIRENRENSMRHSECSNISNQNLQDNDAIAKKDGKPSL
AERLRQLADGTLPIDDRMDRNIRSNRTERSSERTERNFEENSGTRRPNDMPLPLMDIPKF
AGNVQERVDFPPRGPDFRGGPQDPRDYQQRNLTDRDRQNFPRGSTGPLRGSQIDDFMDPR
MQAGRFQDEFESRLGHNGPRSDEFTPRLGPSREDFDRSDIRNRRPVEDYERDRFEYEMRR
DGFDPRLQDGFDPRSHGERPDFDPRRRDFFGGPMDPVFGIPPMMGLRGPRGPVGPEGFGP
RGSGMGSRGPGPLIFHPRGMGPRGMRIRPPFGPRGPPPFDPREADPFFRPPFDDVRGPPG
PHMRPFGPMGPPTMHGPEGPWRNQESGAPGPWTSSQSSSTPETDNHSQRENHLARDKQKG
TKHTDYKNNISDRENRNRNRKSRWGNVSPPITENIDEATSAEGIEDKTDLIQDGNFENIE
PKTEIITEYDQSVQMEDDSPTDREQVEEQNDVHHLKIEQSDETNNEELHENQYNEEEQSS
SYQSNVDATSGNDVEQNQCNDDKQCEYQTVGQTEDSSQQCVEQVEKSECVSENNSDQQPI
LEQAADAL
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggtcaaagcatttaacgcagagctttctgcgctgtatgatgttaaaccacca
atttctaaagctaaaatgaattctcttacacgcggagctatcaaagcaataaaattttat
aaacatgttgtacaaagcgtggaaaaatttattcaaaaatgtaaaccagaatataaagtg
ccaggattatacgtaatagattcaatcgtaagacagtcaagacatcaatttggaatggaa
aaagatgtctttgcacctcgttttgcaaaaaatatgcaaacaacttttctgaacctttta
aaatgtccacaggaagataaaagcaaagttatacgtgtattaaatctttggcaaaaaaat
gctgtttttcctccagaagttatacaaccactttttgatttagctgatcccaatcatccc
attcataaagaacaaccagtaaacgcaaatggtacattgaacacatcatctggtaataac
ctgagcaatatttctgcagtaacaaagactcctccatctgccgtaaaggttgttgcaaaa
gatcagaaattattttcttccactaaaccaattgacccagtatggctagcacaaacaaag
atagaaacagctaacatagggcaatctaatgcaaatcaagttgattcatcgtttcttgat
caattacaacatttacaacaattgctgttgaagaagcaagaggccacaaatgaatcgaag
acttccgtaaaatttgataaaaaacttttggatttcgattatggagaagaagaagatgat
gacgttgtggttgcaagttcacctactactgctactgctgctgcatctcaacataacgct
gtatccacaagtaatagtttggaaagccttggattgctactgacaaatcctgaggtactt
agacaactgcagacattacaacaaacgatgcaaggaaatatgtcctcttcgcagcatgaa
atggaagaaaaaatgcgcaaattgcaacagatgaaacaacaagaagaagaatttgataaa
catttggctcaaactgttcctaatttaccttttgcatcagaatgcgagctgaaacctaca
gacattctgaaaccaaatcaacaaagtacgtattcaacaagtacaactactggagttatt
caagatatgactcaaccaccacctggttatcctccagcaatgccatatgtttcgcaacct
ttgtcaaacatgaggcagataaatcaaactggtcatcagaatcaaaaaagtcctttaatc
gacgaacgtcaagaatcgcaagatttttctggaaatggtgcaagacgcgatagtagtagc
gttgaaattgtaaattgtgataatactcgatcacaaagtagatcacctgagagatatagg
catcatagtcggtctagatcacctcggcatagagacagagacagagatagggacagagat
cgaaaatctcgatctagaagtagatcaagaagaagaagatcacgatctagagacagaggt
cgcgatagaaaaagagatgacagccgagagaaaatgaccgaggaagaaagagaaaaggaa
agagaacgtcgtaaacgtggattacctccgataattagagataaattaagcgtttgtagc
acaacgctttgggtcggtcatttatccaaattagttcatcaagaagagttatctgacaca
tttggagagtttggtgacattgttagcatcgatctcatatcacctaggggttgtgctttc
atttgcatgaacagaagacaagatgcttatcgagctcttacaaaattaaagaatcataaa
atgcaagggaaagctataactttagcgtgggctccaggtaaaggagtgaaaggaaaagaa
tggaaagattattgggaagtagaacttggtgtcagttatattccatggaataagttactt
aatattacggatcaagatctagaactattggaagaaggtggtatgatagatgaagataca
ttaccaccaaatttgaaaggaaaattgaagcactctggcgggaatatagatatcatgcaa
catcaattacaaatgcaacaacaggcgttagctgctgcatcgcaacagcagacgcagtta
gtcgatactagccaaccaccaccgatacgaccaccaacatcagctgcacttttgccccct
ccaaacacacaattacaaatgatgccatcagcttttacgatgaccggtgttccacgtatg
ataggacctatgggtctccctatggcacacagtttaatgcctaatgttccaattggagta
cctccacccaatatgcaaagtctcttgggacctccaggaatgatgcagactatgctgact
ccacctgtcaattctccatttggtgcaagtgttggtgtaggtcttttaacgcaaattcca
ttacctgcaccagccgcaccgtcggacaaaccgaattcaactgggatgccacacaatgtt
ccaccgataggagtacctccgcctacctcagaaacaaacataccaaatctaccaatgctt
cgtcagtcttatggagtaggtccagcacccccgatgcagatgcaactacctcaacatcac
tctgatgatatggatgttgaaatggaagatgccatgccactgaacgtgagcaacaacact
tccaaagagaaaccaaatttgagtgatcagcttatagcggcgatgaacatgggtgcaggc
accagtgacaataggctagaaaatgatcaacaaaatatcgattataaagagagagataga
gatcgtgaaaatagagatagaagggatcgtgaacgtgacagaagtgatcgtagtgacgtc
aatgattctagaatggatcgtggtagagacagaggtagaggaagagaccgaggtcgtgat
cgccgtagagatgcgagagatggaagagaaagggatagagatgatagaagagatagagac
aatagagatataagagaaaatcgtgagaattctatgaggcattcggaatgttcaaatata
tcaaatcaaaatcttcaagataacgatgcgatagctaagaaggatgggaaaccaagtctt
gctgagcgattgagacaattggccgatggtacattgcctatagacgatcgtatggataga
aatattcgaagtaacagaaccgaacgaagtagcgagagaactgaaagaaatttcgaagaa
aattctggaactcggagacccaacgatatgccattgccattaatggatatcccaaaattt
gctggtaacgtgcaagaacgtgtagattttcctcctagaggacctgattttcgaggtggt
ccacaagatcctcgagattatcagcaaagaaacctaacggacagagatagacaaaatttt
ccacggggatctactggaccattaagaggatctcagatagatgattttatggatccaaga
atgcaagctggaagatttcaagatgagttcgaaagtagattaggacataatggtccacga
tcggatgaatttacgcctagattaggaccatccagagaagattttgatcggtcggatata
agaaatcgaagaccggttgaagattatgaaagagatcgtttcgaatatgaaatgcgacgc
gacggttttgatccacgtttgcaggatggttttgatccgagaagtcacggcgaacgacct
gattttgatccgcgaagaagagatttctttggaggtccgatggatcctgttttcggaata
ccaccaatgatgggtttgcgaggtccgagaggtcctgtaggacctgaaggatttggaccg
cgtggatctggcatgggatcaagaggaccaggacctttaatcttccatcctcgaggtatg
ggtccacgaggaatgagaattcgacctccgttcggaccacgtggacccccaccgtttgat
cccagagaagctgatcctttcttccggccaccgtttgatgacgtacgcggtccaccaggt
ccacacatgagaccgtttggtccgatgggtccaccaactatgcacggtcccgaaggacct
tggaggaatcaagaaagtggagcaccaggcccatggacatcctcgcaatctagtagtact
ccggaaactgataatcatagccagagagaaaatcatcttgctcgagacaaacaaaaagga
actaaacatacagattataaaaacaatatttcagatagagaaaatcgtaacagaaatagg
aaatcaaggtggggtaatgtaagccctcctataacggaaaatatagacgaagcgacatcc
gccgaaggaattgaagacaagacggacctaatacaggatggaaatttcgaaaacatagaa
cctaaaacagaaataattaccgaatacgatcaatcagtacaaatggaagatgatagccct
actgatagagagcaagtcgaagagcaaaatgatgtgcatcatttaaaaattgaacagagt
gatgaaaccaataacgaagaactacatgaaaatcaatataacgaagaagaacaaagtagt
tcctatcaatctaatgtagatgcaacttctggcaatgacgttgaacaaaatcagtgtaat
gatgataaacaatgtgaatatcagacagtcggtcaaacagaggactcgtcgcaacaatgt
gtggagcaagttgaaaaatctgagtgtgtgagtgaaaataatagtgaccaacaaccaatt
ctggagcaagcagcagatgctttgtaa
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integrated database retrieval system
