Vespula pensylvanica (western yellowjacket): 122627215
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Entry
122627215 CDS
T07720
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps04140
Autophagy - animal
vps04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122627215
04148 Efferocytosis
122627215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vps04131
]
122627215
Membrane trafficking [BR:
vps04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122627215
Hops complex
122627215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_11
zf-RING_5
zf_RING_Vps8
zf-RING_16
zf-C3HC4
zf-RING_Vps41
zf-RING_UBOX
zf-RING_2
zf-C3H2C3
zf_RING_Vps8_fungal
Synaptonemal_3
Nup54_57_C
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
122627215
NCBI-ProteinID:
XP_043664128
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Position
1:3207742..3213504
Genome browser
AA seq
1000 aa
AA seq
DB search
MTSMFDQYEQASQRSKQVVPPPIRTDISTAGFIQMKLQDDGPIFTKQKIIFSPSDKIIHL
VVSSNLIIIAMANNVLLRIDMKQPDKVEEIDISKYAVGMKMSNLFLDPLGYHLLITLTPK
NGDNPPPELLYLHRKTTKLKQAGKFKGHEITAVGWNFSNISETVTGPILVGTSKGLIFET
EISDGDKIFNTSLEQYWRQLPNYLPLYGAKEVEGLVFDIGKNSKPPITGLEFHKIPNSDK
YMIIVTTIMRIYQYIGSVQNPDEKPLLQQVFNKYLNVQESFVEVISSLTYSKLQFYYPSL
GVLPKSFGWLTETGILYAHIDPNLSDPKNALIKQQMIICPEASLMGNSKSHTNTAPLSFV
LTEFHALLLYPDRVKGISLLNQDLIFEDIYNDTVEKLLNIVKDPINRSIWAYSERAVFKY
KVTKEDRNVWQVYLDKGEFELAKQYCKDNPAYIDQVLVKQAEMLFKNEQYEESALTYADT
HSSFEEISLKFLQEWQIEALKIFLKKKLGGLKPQDKTQITMIVVWVIELFMSQMGEVRSN
DSSYTHNPQYIALQKQFDSFLAMQKVEDCIKRNRKTIYELMSSHGDKENLMRLTIMHSNH
EEVIRQHLYKNNYLEALEVLKSQTNKDLFYQFSGTLLQELPRPTVTALISQGSLLKPSKL
LPALVSCNSDEKHAKEIIRYLEFCIYKQSCQEQAIHNFLLSLYARYKKEEVMHYISSQGQ
YISMVHYDVHYALRLCQEVGLTEACVQLSALLGLWTTAVDLALTIKVDLAKQIAAMPSER
DDTLRKKLWLKIAEHVVREKNDIQQVMEFLQQCDLVRIEDILPFFSDFVTIDHFKDAICK
SLQDYNRHIQDLKEEMEEATKAAEVIRKDIQAFRTRCTFVDARDTCNSCDIQLLLRPFYV
FPCGHRFHSDCLVAALTPMLSMDQRTKLADLQRQLTAISNRSEDTTSIGLVSLSIKDQIK
ADIDELVASECLYCGELMIESIDKPFIEEEDYERVMREWA
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgatgtttgatcagtatgaacaagcatctcaaagatctaaacaagtagttcct
ccacctattcgaacagatattagcacagctggctttatccaaatgaagttacaagatgac
ggtccaatattcacaaaacagaaaatcatcttttcgccctctgataaaattattcaccta
gtagtcagtagtaatttaattataatagctatggctaataatgttcttcttcgtatcgat
atgaaacaacctgataaagtagaggaaattgacatttcaaaatatgcagtaggcatgaag
atgtcaaatctatttttggatcctttaggttatcatttgttaataacattgactccaaaa
aatggagataatcctccaccggaattattatatttacatagaaaaacaaccaaattaaaa
caagctgggaagtttaaaggtcatgaaattaccgcggtaggatggaacttttcaaatatt
tcggaaaccgtaacaggacctattcttgtgggtacttcaaaaggtttaatttttgaaaca
gaaattagcgatggagataaaatatttaacacaagcttggagcagtattggcggcagctt
cctaactatttacctctttatggtgctaaggaggtagaaggattggtatttgatatagga
aagaatagtaaacctccaattactggcttagaattccataagatacctaactctgataaa
tatatgattattgtaactactattatgcgtatttatcaatacattggatcagtacaaaat
cctgatgaaaagcccttattacagcaagtatttaataaatatttaaatgtacaagaaagt
tttgtggaagtaataagttctttaacttactcgaaattacaattttattatccatcactt
ggtgtattaccaaaatcatttggttggttgactgagacaggtatattgtatgcacatata
gacccaaacttatctgatccaaaaaatgcattgataaagcaacagatgataatatgtcca
gaagccagtctaatgggaaacagcaaatctcatactaatactgcaccactttccttcgtg
ttaacggaatttcatgctttattactttatccggatcgtgtgaaaggcatatcactatta
aatcaagaccttatttttgaagatatatataacgatacagttgaaaagttactcaatatt
gtgaaagatccgataaaccgcagtatctgggcttacagtgaaagagcagtcttcaaatac
aaagtgacgaaggaagacagaaatgtttggcaggtttatttagacaaaggagaattcgag
cttgctaaacaatattgcaaagataatcctgcatacattgatcaagtacttgtcaaacaa
gctgaaatgctatttaaaaatgaacaatacgaggaaagtgctttaacatatgcagatact
cattcatcttttgaagaaatttcattgaaatttcttcaggaatggcagatagaagctttg
aaaatatttttgaaaaagaaactcggtggtttgaaacctcaagataagactcaaataact
atgattgttgtatgggtaatagaattatttatgagtcaaatgggagaagtaagaagcaat
gatagctcatatactcataatccacagtatatagcattgcaaaaacaatttgatagtttt
ttagctatgcaaaaagttgaagattgtataaagagaaatcgtaaaacaatttatgagtta
atgtcaagtcatggggataaagaaaatcttatgcgtttaacgataatgcatagtaatcac
gaagaagtaataagacaacatttatataaaaataattatttagaagcccttgaagtatta
aaaagtcaaacgaacaaagatttattttatcaattctctggcactttgcttcaagaattg
ccacgtcctactgtgactgctctaatttcgcaaggatctttattgaagccatcaaaattg
cttccagctttagtatcttgtaacagtgatgaaaaacacgctaaagaaattatcagatat
ttagaattttgcatatacaaacaaagttgccaggaacaagcgattcataattttttactt
tcactatatgctcgttataaaaaagaagaagttatgcattatatcagctcacaaggtcaa
tatataagtatggtacattatgatgtacattatgccttaagattgtgtcaggaggttggt
ttaacagaagcatgtgtacaattatcagccttgcttggtttgtggacaacagcagtagat
ttggcattaacaattaaagttgatctcgctaaacaaattgcggctatgccctctgaacgt
gatgatactttacgtaaaaaattatggttaaaaatagctgaacacgtagtgcgtgagaag
aatgatatacaacaagtaatggaatttttacaacaatgtgatttagttaggatagaagat
attttaccattcttttcagattttgttacaatagatcattttaaagatgccatttgtaaa
tccctacaggattataatcggcatattcaagatctgaaagaagaaatggaagaggcaaca
aaagcagctgaagttattagaaaggatatacaagcttttagaaccaggtgcacttttgta
gatgcaagagatacatgcaattcttgtgatattcaacttttattaaggcctttctatgta
tttccttgtggacatagatttcacagcgattgtcttgttgctgcattaacacctatgtta
tcaatggatcaacgaacaaaacttgctgatcttcaacgtcaacttacagctatttcaaat
agatccgaagatacaacatcaattggattggtatctctatcgattaaagatcaaattaaa
gctgatatagacgaattggtagcttcagaatgtttatactgcggagaacttatgatagaa
tcaattgataagccatttatagaagaagaagattatgaaagagtaatgagagaatgggca
taa
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