Vespula pensylvanica (western yellowjacket): 122627959
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Entry
122627959 CDS
T07720
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122627959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vps03041
]
122627959
Spliceosome [BR:
vps03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
122627959
Complex C
U5 SnRNP specific factors
122627959
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_EIPR1
ANAPC4_WD40
NBCH_WD40
Beta-prop_SPT8
eIF2A
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
WD_LRWD1
Phage_min_tail
Motif
Other DBs
NCBI-GeneID:
122627959
NCBI-ProteinID:
XP_043665589
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All DBs
Position
3:3771850..3773671
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AA seq
349 aa
AA seq
DB search
MPILDKRKGDDILALVPASKRTKNEVVFSSREKAVVQSGPPRTSSLMAPIMLLEGHQGDV
FSLEFHPEGQYLASTGFDRQIFIWNVYGECENISTMTGHSGAVMELHFSPDGSNLYTAST
DMTLGLWDIVVGTRIKKLKGHTSFVNSVAGARRGPTQLCSGSDDSTIRVWDPRKRGQCYT
LNNTYQVTSVTFNDTAEQVISGGIDNDIKVWDLRKNSILYKLKGHSETITGLSLSPDGSY
ILSNAMDNTLRIWDVRPFAPYERCVKILSGHQHNFEKNLQRCAWSPDGSKVSAGSSDRFQ
YIWDTTSRRILYKLPGHNGSVNDVDFHPKEPIVCSGSSDKQIYIGEIET
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcctattttggataagcgaaaaggagacgatatcttagcattagttcctgcttcaaaa
agaaccaaaaatgaagtcgtcttcagcagcagagaaaaagcagtggttcaaagcggacca
ccacgaacatcatcgttaatggctcctatcatgctcctggaaggacatcaaggcgatgtt
ttttcgcttgaatttcatccggagggccaatatcttgcatctactggatttgatcgacaa
atctttatttggaatgtctatggggaatgtgaaaatatctctacaatgactggtcatagt
ggagctgtaatggaattacattttagtccagatggaagtaacttgtatacagctagtaca
gatatgaccttaggtttatgggatatagtagtaggcacaagaatcaaaaaattgaaagga
catacctcttttgttaattctgtagctggagctagaagaggacctacacaattatgttca
ggtagcgatgatagcacaatacgtgtttgggatccaagaaaaagaggacaatgttatacg
ttaaataatacatatcaggtaacttcagtaacatttaatgacacggcggaacaagtaata
agcggtggcattgacaatgatattaaagtatgggatttgagaaagaattcaatcctttac
aaattaaaaggacactccgaaactattactggattaagtcttagtcctgatggttcatat
attctatcaaatgccatggataatactttaagaatatgggatgtaagaccttttgctcca
tacgaacgttgcgtgaaaattctgtctggtcatcaacataatttcgaaaagaatcttcaa
agatgcgcatggtctccagatggtagtaaagtatcagccggttcatcagatagatttcaa
tatatttgggataccactagtcgtagaatattatataaattacctggacataatggctct
gtaaatgacgttgattttcatccaaaggaaccaatagtgtgctctggatcaagtgacaaa
caaatatatataggagaaatcgaaacataa
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